Top 10 genes with highest correlation to Rv1045/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3643/- | (cc=0.6289) | info on Rv3643/- |
| Rv1686c/- | (cc=0.52) | info on Rv1686c/- |
| Rv3506/fadD17 | (cc=0.4986) | info on Rv3506/fadD17 |
| Rv0442c/PPE10 | (cc=0.4965) | info on Rv0442c/PPE10 |
| Rv0264c/- | (cc=0.4961) | info on Rv0264c/- |
| Rv0870c/- | (cc=0.4954) | info on Rv0870c/- |
| Rv2077c/- | (cc=0.4897) | info on Rv2077c/- |
| Rv1781c/malQ | (cc=0.4896) | info on Rv1781c/malQ |
| Rv3390/lpqD | (cc=0.4684) | info on Rv3390/lpqD |
| Rv3353c/- | (cc=0.4669) | info on Rv3353c/- |
Correlation of Rv1045/- with Rv3390/lpqD
Normalized LFCs for Rv1045/-:
(description and provenance of datasets)
| Rv1045/- | Rv3390/lpqD | |
| Fe_supp_jason_reseq | -0.237 | -0.23 |
| low_pH_jason_reseq | -0.199 | -1.22 |
| NO_jason_reseq | -0.192 | -0.341 |
| B6_jason_reseq | -1.018 | -0.213 |
| MHCII_jason_reseq | -0.226 | -0.257 |
| Isoniazid02 | -0.34 | 0.457 |
| Rifampicin4 | -0.42 | 0.011 |
| Ethambutol3 | -0.648 | 0.074 |
| Meropenem3 | -0.333 | 0.654 |
| Vancomycin16 | -0.467 | 0.119 |
| Rv2680_day32 | 1.033 | 1.066 |
| H37Rv_KO_MarP | 0.34 | 0.395 |
| hypoxia_3wks | -0.742 | -0.347 |
| hypoxia_6wks | 0.104 | -0.411 |
| glycerol | -0.227 | -0.407 |
| cholesterol | -0.35 | -0.02 |
| AJ | 0.422 | 0.136 |
| Bibs02 | -0.163 | 0.322 |
| Bibs02c | -0.267 | -0.003 |
| BL6 | -0.787 | -0.755 |
| BL6a | -0.428 | -0.119 |
| BXD01 | -1.129 | -0.646 |
| BXD010 | -0.847 | -0.19 |
| BXD011 | -0.747 | 0.013 |
| BXD03 | -0.141 | 0.074 |
| BXD04 | -1.072 | -0.068 |
| BXD05 | -1.075 | -0.457 |
| BXD06 | -0.962 | -0.201 |
| BXD07 | -1.291 | -0.313 |
| BXD08 | -0.688 | -0.228 |
| BXD09 | -0.642 | -0.187 |
| CAST | -0.249 | 0.08 |
| CCcont | -0.62 | -0.316 |
| DS01 | 0.056 | 0.181 |
| DS02 | -0.277 | -0.34 |
| DS04 | -0.24 | -0.134 |
| DS0c | -0.424 | 0.148 |
| GP01 | 0.366 | 0.032 |
| GP02 | 0.979 | 0.696 |
| GP0c | 0.148 | -0.519 |
| NOD | 0.807 | -0.495 |
| NZO | -0.634 | -0.142 |
| PWK | -0.212 | 0.463 |
| H37Rv_KO_CtpC | 0.0 | 0.162 |
| H37Rv_KO_CtpD | 0.586 | 0.737 |
| H37Rv_KO_Rv1272 | -0.224 | 0.784 |
| H37Rv_KO_SugABC | -0.265 | -0.314 |
| H37Rv_KO_MbtN | -1.051 | -0.112 |
| Trans05 | 1.175 | 0.391 |
| macrophage_unactivated | -0.571 | 0.331 |
| IL1 | -0.128 | -0.208 |
| Rapamycin | -0.433 | 0.046 |
| Tcell | -0.72 | -0.114 |
| GMCSF | -0.055 | 1.061 |
| IFNab | -0.221 | 0.139 |
| IFNg | -0.134 | 0.059 |
| IFNg_GMCSF1 | 0.361 | 0.578 |
| Rv1432_day32 | -0.078 | 0.567 |
| Rv1565c_day32 | 0.227 | -0.16 |
| secA2_input | -1.504 | -0.056 |
| delta_Rv3594 | -0.987 | 0.017 |
| delta_Rv3717 | -0.361 | -0.396 |
| delta_Rv3811 | -0.503 | -0.367 |
| delta_Rv0954 | -0.211 | 0.081 |
| PonA1 | -0.434 | -0.601 |
| EccD1_KO | -0.503 | -0.349 |
| EspI_KO | 0.0 | -0.55 |
| PE35_KO | -0.718 | -0.309 |
| PPE68_KO | -1.273 | -0.678 |
| glycerol2 | 0.277 | 0.706 |
| lignocerate | 1.024 | 0.605 |
| oleate | -0.326 | 0.447 |
| phosphatidylcholine | 0.497 | 0.451 |
| acetate | 0.758 | 0.229 |
| glucAc | 0.823 | 0.118 |
| Rv0950ko | -0.018 | 0.724 |
| Rv1096ko | -0.072 | 0.148 |
| Rv3684ko | 0.786 | -0.151 |
| delta_otsA_trehalose | 0.12 | 0.45 |