Top 10 genes with highest correlation to Rv1045/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3643/- | (cc=0.6289) | info on Rv3643/- |
| Rv1686c/- | (cc=0.52) | info on Rv1686c/- |
| Rv3506/fadD17 | (cc=0.4986) | info on Rv3506/fadD17 |
| Rv0442c/PPE10 | (cc=0.4965) | info on Rv0442c/PPE10 |
| Rv0264c/- | (cc=0.4961) | info on Rv0264c/- |
| Rv0870c/- | (cc=0.4954) | info on Rv0870c/- |
| Rv2077c/- | (cc=0.4897) | info on Rv2077c/- |
| Rv1781c/malQ | (cc=0.4896) | info on Rv1781c/malQ |
| Rv3390/lpqD | (cc=0.4684) | info on Rv3390/lpqD |
| Rv3353c/- | (cc=0.4669) | info on Rv3353c/- |
Correlation of Rv1045/- with Rv3353c/-
Normalized LFCs for Rv1045/-:
(description and provenance of datasets)
| Rv1045/- | Rv3353c/- | |
| Fe_supp_jason_reseq | -0.237 | -0.717 |
| low_pH_jason_reseq | -0.199 | -0.11 |
| NO_jason_reseq | -0.192 | -0.278 |
| B6_jason_reseq | -1.018 | 0.221 |
| MHCII_jason_reseq | -0.226 | 1.201 |
| Isoniazid02 | -0.34 | -0.202 |
| Rifampicin4 | -0.42 | -0.376 |
| Ethambutol3 | -0.648 | -0.405 |
| Meropenem3 | -0.333 | -0.026 |
| Vancomycin16 | -0.467 | 0.172 |
| Rv2680_day32 | 1.033 | -1.07 |
| H37Rv_KO_MarP | 0.34 | 0.638 |
| hypoxia_3wks | -0.742 | -0.478 |
| hypoxia_6wks | 0.104 | -1.063 |
| glycerol | -0.227 | 0.846 |
| cholesterol | -0.35 | 0.675 |
| AJ | 0.422 | 0.62 |
| Bibs02 | -0.163 | 0.603 |
| Bibs02c | -0.267 | -0.582 |
| BL6 | -0.787 | -0.568 |
| BL6a | -0.428 | -0.494 |
| BXD01 | -1.129 | -1.238 |
| BXD010 | -0.847 | -2.853 |
| BXD011 | -0.747 | -0.857 |
| BXD03 | -0.141 | -0.144 |
| BXD04 | -1.072 | -1.562 |
| BXD05 | -1.075 | -1.466 |
| BXD06 | -0.962 | -1.137 |
| BXD07 | -1.291 | -1.715 |
| BXD08 | -0.688 | -1.122 |
| BXD09 | -0.642 | -1.577 |
| CAST | -0.249 | 0.127 |
| CCcont | -0.62 | -0.098 |
| DS01 | 0.056 | -0.137 |
| DS02 | -0.277 | -0.471 |
| DS04 | -0.24 | 0.793 |
| DS0c | -0.424 | -0.572 |
| GP01 | 0.366 | -0.708 |
| GP02 | 0.979 | 0.932 |
| GP0c | 0.148 | -2.083 |
| NOD | 0.807 | 0.848 |
| NZO | -0.634 | 0.533 |
| PWK | -0.212 | 0.443 |
| H37Rv_KO_CtpC | 0.0 | 0.684 |
| H37Rv_KO_CtpD | 0.586 | 0.211 |
| H37Rv_KO_Rv1272 | -0.224 | -0.093 |
| H37Rv_KO_SugABC | -0.265 | -2.271 |
| H37Rv_KO_MbtN | -1.051 | -1.938 |
| Trans05 | 1.175 | -0.616 |
| macrophage_unactivated | -0.571 | -1.218 |
| IL1 | -0.128 | -3.1 |
| Rapamycin | -0.433 | -1.553 |
| Tcell | -0.72 | -1.548 |
| GMCSF | -0.055 | -1.45 |
| IFNab | -0.221 | -3.205 |
| IFNg | -0.134 | -4.196 |
| IFNg_GMCSF1 | 0.361 | -0.591 |
| Rv1432_day32 | -0.078 | 0.0 |
| Rv1565c_day32 | 0.227 | -0.504 |
| secA2_input | -1.504 | -0.712 |
| delta_Rv3594 | -0.987 | -0.595 |
| delta_Rv3717 | -0.361 | 0.132 |
| delta_Rv3811 | -0.503 | 0.8 |
| delta_Rv0954 | -0.211 | 1.271 |
| PonA1 | -0.434 | 1.024 |
| EccD1_KO | -0.503 | 0.358 |
| EspI_KO | 0.0 | -0.471 |
| PE35_KO | -0.718 | -0.866 |
| PPE68_KO | -1.273 | -0.682 |
| glycerol2 | 0.277 | 2.969 |
| lignocerate | 1.024 | 3.989 |
| oleate | -0.326 | -1.691 |
| phosphatidylcholine | 0.497 | 2.968 |
| acetate | 0.758 | 3.361 |
| glucAc | 0.823 | 2.601 |
| Rv0950ko | -0.018 | -0.826 |
| Rv1096ko | -0.072 | 0.905 |
| Rv3684ko | 0.786 | 2.112 |
| delta_otsA_trehalose | 0.12 | -0.27 |