Top 10 genes with highest correlation to Rv1045/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3643/- | (cc=0.6289) | info on Rv3643/- |
| Rv1686c/- | (cc=0.52) | info on Rv1686c/- |
| Rv3506/fadD17 | (cc=0.4986) | info on Rv3506/fadD17 |
| Rv0442c/PPE10 | (cc=0.4965) | info on Rv0442c/PPE10 |
| Rv0264c/- | (cc=0.4961) | info on Rv0264c/- |
| Rv0870c/- | (cc=0.4954) | info on Rv0870c/- |
| Rv2077c/- | (cc=0.4897) | info on Rv2077c/- |
| Rv1781c/malQ | (cc=0.4896) | info on Rv1781c/malQ |
| Rv3390/lpqD | (cc=0.4684) | info on Rv3390/lpqD |
| Rv3353c/- | (cc=0.4669) | info on Rv3353c/- |
Correlation of Rv1045/- with Rv3643/-
Normalized LFCs for Rv1045/-:
(description and provenance of datasets)
| Rv1045/- | Rv3643/- | |
| Fe_supp_jason_reseq | -0.237 | 0.011 |
| low_pH_jason_reseq | -0.199 | -0.612 |
| NO_jason_reseq | -0.192 | -0.378 |
| B6_jason_reseq | -1.018 | -0.87 |
| MHCII_jason_reseq | -0.226 | 0.147 |
| Isoniazid02 | -0.34 | -0.013 |
| Rifampicin4 | -0.42 | -0.988 |
| Ethambutol3 | -0.648 | -0.124 |
| Meropenem3 | -0.333 | -0.145 |
| Vancomycin16 | -0.467 | -1.093 |
| Rv2680_day32 | 1.033 | 0.824 |
| H37Rv_KO_MarP | 0.34 | 0.23 |
| hypoxia_3wks | -0.742 | -0.821 |
| hypoxia_6wks | 0.104 | 0.288 |
| glycerol | -0.227 | -2.424 |
| cholesterol | -0.35 | -0.858 |
| AJ | 0.422 | -0.602 |
| Bibs02 | -0.163 | -0.06 |
| Bibs02c | -0.267 | -0.508 |
| BL6 | -0.787 | -0.906 |
| BL6a | -0.428 | -1.884 |
| BXD01 | -1.129 | -3.35 |
| BXD010 | -0.847 | -2.188 |
| BXD011 | -0.747 | -1.273 |
| BXD03 | -0.141 | -1.597 |
| BXD04 | -1.072 | -1.46 |
| BXD05 | -1.075 | -2.02 |
| BXD06 | -0.962 | -1.867 |
| BXD07 | -1.291 | -2.116 |
| BXD08 | -0.688 | -1.962 |
| BXD09 | -0.642 | -2.596 |
| CAST | -0.249 | 0.502 |
| CCcont | -0.62 | -1.763 |
| DS01 | 0.056 | -0.517 |
| DS02 | -0.277 | -1.66 |
| DS04 | -0.24 | -0.72 |
| DS0c | -0.424 | -0.825 |
| GP01 | 0.366 | 0.899 |
| GP02 | 0.979 | -0.635 |
| GP0c | 0.148 | -0.893 |
| NOD | 0.807 | 0.913 |
| NZO | -0.634 | -0.228 |
| PWK | -0.212 | -0.051 |
| H37Rv_KO_CtpC | 0.0 | 0.743 |
| H37Rv_KO_CtpD | 0.586 | 0.584 |
| H37Rv_KO_Rv1272 | -0.224 | 0.129 |
| H37Rv_KO_SugABC | -0.265 | -0.668 |
| H37Rv_KO_MbtN | -1.051 | -0.577 |
| Trans05 | 1.175 | 0.645 |
| macrophage_unactivated | -0.571 | -1.521 |
| IL1 | -0.128 | -1.43 |
| Rapamycin | -0.433 | -1.043 |
| Tcell | -0.72 | -1.571 |
| GMCSF | -0.055 | -1.761 |
| IFNab | -0.221 | -0.698 |
| IFNg | -0.134 | -2.534 |
| IFNg_GMCSF1 | 0.361 | -1.515 |
| Rv1432_day32 | -0.078 | -0.249 |
| Rv1565c_day32 | 0.227 | 0.878 |
| secA2_input | -1.504 | -2.052 |
| delta_Rv3594 | -0.987 | -1.049 |
| delta_Rv3717 | -0.361 | -0.557 |
| delta_Rv3811 | -0.503 | -1.518 |
| delta_Rv0954 | -0.211 | 0.013 |
| PonA1 | -0.434 | 0.419 |
| EccD1_KO | -0.503 | -1.437 |
| EspI_KO | 0.0 | -2.125 |
| PE35_KO | -0.718 | -0.904 |
| PPE68_KO | -1.273 | -0.928 |
| glycerol2 | 0.277 | 0.369 |
| lignocerate | 1.024 | 1.303 |
| oleate | -0.326 | 0.196 |
| phosphatidylcholine | 0.497 | 0.531 |
| acetate | 0.758 | 2.635 |
| glucAc | 0.823 | 0.792 |
| Rv0950ko | -0.018 | -0.292 |
| Rv1096ko | -0.072 | -0.639 |
| Rv3684ko | 0.786 | -0.485 |
| delta_otsA_trehalose | 0.12 | 1.977 |