Top 10 genes with highest correlation to Rv1044/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2474c/- | (cc=0.529) | info on Rv2474c/- |
| Rv2841c/nusA | (cc=0.5161) | info on Rv2841c/nusA |
| Rv0079/- | (cc=0.5054) | info on Rv0079/- |
| Rv1160/mutT2 | (cc=0.4913) | info on Rv1160/mutT2 |
| Rv0316/- | (cc=0.4726) | info on Rv0316/- |
| Rv3758c/proV | (cc=0.4633) | info on Rv3758c/proV |
| Rv1763/- | (cc=0.4622) | info on Rv1763/- |
| Rv0228/- | (cc=0.4589) | info on Rv0228/- |
| Rv1676/- | (cc=0.4588) | info on Rv1676/- |
| Rv0984/moaB2 | (cc=0.4538) | info on Rv0984/moaB2 |
Correlation of Rv1044/- with Rv2841c/nusA
Normalized LFCs for Rv1044/-:
(description and provenance of datasets)
| Rv1044/- | Rv2841c/nusA | |
| Fe_supp_jason_reseq | 1.163 | 0.0 |
| low_pH_jason_reseq | -0.768 | 0.0 |
| NO_jason_reseq | -0.116 | 0.0 |
| B6_jason_reseq | -1.759 | 0.0 |
| MHCII_jason_reseq | 0.498 | 0.0 |
| Isoniazid02 | 0.0 | -0.201 |
| Rifampicin4 | 0.558 | 0.0 |
| Ethambutol3 | 0.066 | 0.423 |
| Meropenem3 | 0.065 | -0.165 |
| Vancomycin16 | 0.796 | 0.0 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | -0.272 | 0.0 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | 0.274 | 0.0 |
| glycerol | -1.583 | 0.202 |
| cholesterol | -0.492 | 0.509 |
| AJ | -0.983 | 0.0 |
| Bibs02 | 1.403 | 0.0 |
| Bibs02c | -0.797 | 0.0 |
| BL6 | -0.53 | 0.0 |
| BL6a | -0.927 | 0.0 |
| BXD01 | -0.343 | 0.0 |
| BXD010 | -1.586 | 0.0 |
| BXD011 | -0.782 | 0.0 |
| BXD03 | -0.762 | 0.0 |
| BXD04 | -0.42 | 0.0 |
| BXD05 | 0.283 | 0.0 |
| BXD06 | -0.892 | 0.0 |
| BXD07 | -1.085 | 0.0 |
| BXD08 | -1.127 | 0.0 |
| BXD09 | -0.596 | 0.0 |
| CAST | -1.185 | 0.439 |
| CCcont | -0.393 | 0.0 |
| DS01 | -1.215 | 0.83 |
| DS02 | -0.922 | 0.0 |
| DS04 | 0.056 | 0.0 |
| DS0c | 0.556 | 0.0 |
| GP01 | -0.462 | 0.0 |
| GP02 | -0.885 | 0.0 |
| GP0c | 0.391 | 0.0 |
| NOD | -1.051 | 0.225 |
| NZO | -1.026 | 0.0 |
| PWK | 0.364 | 0.0 |
| H37Rv_KO_CtpC | -1.486 | 0.571 |
| H37Rv_KO_CtpD | 1.889 | 0.0 |
| H37Rv_KO_Rv1272 | -1.29 | 0.0 |
| H37Rv_KO_SugABC | -0.224 | 0.0 |
| H37Rv_KO_MbtN | 1.486 | 0.103 |
| Trans05 | 0.038 | 0.131 |
| macrophage_unactivated | 0.398 | -2.14 |
| IL1 | -2.251 | -2.011 |
| Rapamycin | -2.001 | -2.081 |
| Tcell | -3.05 | -2.209 |
| GMCSF | -2.64 | -1.79 |
| IFNab | -1.817 | -2.05 |
| IFNg | -1.743 | -1.812 |
| IFNg_GMCSF1 | -2.564 | -2.13 |
| Rv1432_day32 | -0.748 | -1.124 |
| Rv1565c_day32 | -0.218 | 0.0 |
| secA2_input | 0.398 | -0.216 |
| delta_Rv3594 | 0.0 | 0.742 |
| delta_Rv3717 | -0.308 | 0.736 |
| delta_Rv3811 | 0.532 | 1.261 |
| delta_Rv0954 | 1.009 | 0.178 |
| PonA1 | 0.413 | 0.0 |
| EccD1_KO | -0.132 | -0.595 |
| EspI_KO | -0.348 | -0.799 |
| PE35_KO | -0.481 | -0.817 |
| PPE68_KO | -0.39 | -0.896 |
| glycerol2 | -0.27 | 0.0 |
| lignocerate | -0.113 | 0.0 |
| oleate | -0.274 | 0.0 |
| phosphatidylcholine | -0.42 | 0.0 |
| acetate | 0.283 | 0.0 |
| glucAc | 0.333 | 0.0 |
| Rv0950ko | 0.528 | 0.727 |
| Rv1096ko | 0.271 | 0.727 |
| Rv3684ko | 0.707 | 1.772 |
| delta_otsA_trehalose | 0.599 | 0.133 |