Top 10 genes with highest correlation to Rv1044/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2474c/- | (cc=0.529) | info on Rv2474c/- |
| Rv2841c/nusA | (cc=0.5161) | info on Rv2841c/nusA |
| Rv0079/- | (cc=0.5054) | info on Rv0079/- |
| Rv1160/mutT2 | (cc=0.4913) | info on Rv1160/mutT2 |
| Rv0316/- | (cc=0.4726) | info on Rv0316/- |
| Rv3758c/proV | (cc=0.4633) | info on Rv3758c/proV |
| Rv1763/- | (cc=0.4622) | info on Rv1763/- |
| Rv0228/- | (cc=0.4589) | info on Rv0228/- |
| Rv1676/- | (cc=0.4588) | info on Rv1676/- |
| Rv0984/moaB2 | (cc=0.4538) | info on Rv0984/moaB2 |
Correlation of Rv1044/- with Rv1763/-
Normalized LFCs for Rv1044/-:
(description and provenance of datasets)
| Rv1044/- | Rv1763/- | |
| Fe_supp_jason_reseq | 1.163 | -0.073 |
| low_pH_jason_reseq | -0.768 | 0.753 |
| NO_jason_reseq | -0.116 | -0.486 |
| B6_jason_reseq | -1.759 | -0.009 |
| MHCII_jason_reseq | 0.498 | 0.467 |
| Isoniazid02 | 0.0 | 0.301 |
| Rifampicin4 | 0.558 | 1.235 |
| Ethambutol3 | 0.066 | 1.385 |
| Meropenem3 | 0.065 | 0.144 |
| Vancomycin16 | 0.796 | 0.645 |
| Rv2680_day32 | 0.0 | -0.269 |
| H37Rv_KO_MarP | -0.272 | -0.36 |
| hypoxia_3wks | 0.0 | 0.961 |
| hypoxia_6wks | 0.274 | -0.157 |
| glycerol | -1.583 | -0.673 |
| cholesterol | -0.492 | -0.079 |
| AJ | -0.983 | 1.577 |
| Bibs02 | 1.403 | 0.094 |
| Bibs02c | -0.797 | 0.965 |
| BL6 | -0.53 | 0.481 |
| BL6a | -0.927 | 0.314 |
| BXD01 | -0.343 | 0.187 |
| BXD010 | -1.586 | 0.366 |
| BXD011 | -0.782 | 0.317 |
| BXD03 | -0.762 | 0.541 |
| BXD04 | -0.42 | 0.242 |
| BXD05 | 0.283 | 0.709 |
| BXD06 | -0.892 | 0.295 |
| BXD07 | -1.085 | 0.354 |
| BXD08 | -1.127 | 0.18 |
| BXD09 | -0.596 | 0.066 |
| CAST | -1.185 | 0.823 |
| CCcont | -0.393 | -0.534 |
| DS01 | -1.215 | 0.462 |
| DS02 | -0.922 | 0.715 |
| DS04 | 0.056 | 0.651 |
| DS0c | 0.556 | 0.976 |
| GP01 | -0.462 | 0.938 |
| GP02 | -0.885 | 1.192 |
| GP0c | 0.391 | 0.273 |
| NOD | -1.051 | 0.01 |
| NZO | -1.026 | 1.009 |
| PWK | 0.364 | 1.716 |
| H37Rv_KO_CtpC | -1.486 | 0.387 |
| H37Rv_KO_CtpD | 1.889 | -0.191 |
| H37Rv_KO_Rv1272 | -1.29 | 0.181 |
| H37Rv_KO_SugABC | -0.224 | -0.144 |
| H37Rv_KO_MbtN | 1.486 | 1.569 |
| Trans05 | 0.038 | 0.289 |
| macrophage_unactivated | 0.398 | -1.158 |
| IL1 | -2.251 | -2.426 |
| Rapamycin | -2.001 | -1.541 |
| Tcell | -3.05 | -2.092 |
| GMCSF | -2.64 | -1.695 |
| IFNab | -1.817 | -2.969 |
| IFNg | -1.743 | -1.478 |
| IFNg_GMCSF1 | -2.564 | -0.874 |
| Rv1432_day32 | -0.748 | 1.764 |
| Rv1565c_day32 | -0.218 | 0.281 |
| secA2_input | 0.398 | 0.767 |
| delta_Rv3594 | 0.0 | 0.285 |
| delta_Rv3717 | -0.308 | -0.239 |
| delta_Rv3811 | 0.532 | -0.031 |
| delta_Rv0954 | 1.009 | 0.735 |
| PonA1 | 0.413 | -0.524 |
| EccD1_KO | -0.132 | -0.217 |
| EspI_KO | -0.348 | 0.682 |
| PE35_KO | -0.481 | 0.327 |
| PPE68_KO | -0.39 | 0.102 |
| glycerol2 | -0.27 | -0.014 |
| lignocerate | -0.113 | -0.314 |
| oleate | -0.274 | 0.167 |
| phosphatidylcholine | -0.42 | 0.077 |
| acetate | 0.283 | 0.805 |
| glucAc | 0.333 | 1.382 |
| Rv0950ko | 0.528 | 0.238 |
| Rv1096ko | 0.271 | 0.362 |
| Rv3684ko | 0.707 | -0.21 |
| delta_otsA_trehalose | 0.599 | 0.448 |