Top 10 genes with highest correlation to Rv1044/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2474c/- | (cc=0.529) | info on Rv2474c/- |
| Rv2841c/nusA | (cc=0.5161) | info on Rv2841c/nusA |
| Rv0079/- | (cc=0.5054) | info on Rv0079/- |
| Rv1160/mutT2 | (cc=0.4913) | info on Rv1160/mutT2 |
| Rv0316/- | (cc=0.4726) | info on Rv0316/- |
| Rv3758c/proV | (cc=0.4633) | info on Rv3758c/proV |
| Rv1763/- | (cc=0.4622) | info on Rv1763/- |
| Rv0228/- | (cc=0.4589) | info on Rv0228/- |
| Rv1676/- | (cc=0.4588) | info on Rv1676/- |
| Rv0984/moaB2 | (cc=0.4538) | info on Rv0984/moaB2 |
Correlation of Rv1044/- with Rv2474c/-
Normalized LFCs for Rv1044/-:
(description and provenance of datasets)
| Rv1044/- | Rv2474c/- | |
| Fe_supp_jason_reseq | 1.163 | -1.07 |
| low_pH_jason_reseq | -0.768 | 1.491 |
| NO_jason_reseq | -0.116 | -4.949 |
| B6_jason_reseq | -1.759 | -2.511 |
| MHCII_jason_reseq | 0.498 | -1.549 |
| Isoniazid02 | 0.0 | 2.023 |
| Rifampicin4 | 0.558 | 0.133 |
| Ethambutol3 | 0.066 | -0.062 |
| Meropenem3 | 0.065 | -0.558 |
| Vancomycin16 | 0.796 | 0.608 |
| Rv2680_day32 | 0.0 | -2.225 |
| H37Rv_KO_MarP | -0.272 | -0.34 |
| hypoxia_3wks | 0.0 | -0.411 |
| hypoxia_6wks | 0.274 | 0.814 |
| glycerol | -1.583 | -0.186 |
| cholesterol | -0.492 | -0.359 |
| AJ | -0.983 | -3.466 |
| Bibs02 | 1.403 | -1.298 |
| Bibs02c | -0.797 | -3.259 |
| BL6 | -0.53 | -2.563 |
| BL6a | -0.927 | -3.514 |
| BXD01 | -0.343 | -2.668 |
| BXD010 | -1.586 | -2.624 |
| BXD011 | -0.782 | -2.609 |
| BXD03 | -0.762 | -2.77 |
| BXD04 | -0.42 | -2.533 |
| BXD05 | 0.283 | -2.757 |
| BXD06 | -0.892 | -2.601 |
| BXD07 | -1.085 | -2.837 |
| BXD08 | -1.127 | -2.725 |
| BXD09 | -0.596 | -2.879 |
| CAST | -1.185 | -2.074 |
| CCcont | -0.393 | -1.017 |
| DS01 | -1.215 | -3.006 |
| DS02 | -0.922 | -1.884 |
| DS04 | 0.056 | -2.469 |
| DS0c | 0.556 | -0.706 |
| GP01 | -0.462 | -2.023 |
| GP02 | -0.885 | -1.705 |
| GP0c | 0.391 | -2.664 |
| NOD | -1.051 | -1.289 |
| NZO | -1.026 | -3.241 |
| PWK | 0.364 | -1.177 |
| H37Rv_KO_CtpC | -1.486 | -2.53 |
| H37Rv_KO_CtpD | 1.889 | -0.863 |
| H37Rv_KO_Rv1272 | -1.29 | -2.62 |
| H37Rv_KO_SugABC | -0.224 | -1.757 |
| H37Rv_KO_MbtN | 1.486 | -1.749 |
| Trans05 | 0.038 | -1.952 |
| macrophage_unactivated | 0.398 | -4.744 |
| IL1 | -2.251 | -4.458 |
| Rapamycin | -2.001 | -4.612 |
| Tcell | -3.05 | -3.848 |
| GMCSF | -2.64 | -3.662 |
| IFNab | -1.817 | -4.193 |
| IFNg | -1.743 | -4.017 |
| IFNg_GMCSF1 | -2.564 | -4.723 |
| Rv1432_day32 | -0.748 | 0.0 |
| Rv1565c_day32 | -0.218 | -1.703 |
| secA2_input | 0.398 | -0.348 |
| delta_Rv3594 | 0.0 | 0.428 |
| delta_Rv3717 | -0.308 | -0.438 |
| delta_Rv3811 | 0.532 | -0.518 |
| delta_Rv0954 | 1.009 | 1.91 |
| PonA1 | 0.413 | 2.086 |
| EccD1_KO | -0.132 | -0.296 |
| EspI_KO | -0.348 | 0.582 |
| PE35_KO | -0.481 | 1.397 |
| PPE68_KO | -0.39 | 1.43 |
| glycerol2 | -0.27 | 1.794 |
| lignocerate | -0.113 | 1.845 |
| oleate | -0.274 | 0.625 |
| phosphatidylcholine | -0.42 | 1.541 |
| acetate | 0.283 | 1.983 |
| glucAc | 0.333 | 1.806 |
| Rv0950ko | 0.528 | -0.691 |
| Rv1096ko | 0.271 | -1.004 |
| Rv3684ko | 0.707 | 1.11 |
| delta_otsA_trehalose | 0.599 | 0.0 |