Top 10 genes with highest correlation to Rv1042c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1149/- | (cc=0.8949) | info on Rv1149/- |
| Rv1041c/- | (cc=0.6823) | info on Rv1041c/- |
| Rv1135c/PPE16 | (cc=0.63) | info on Rv1135c/PPE16 |
| Rv3144c/PPE52 | (cc=0.4829) | info on Rv3144c/PPE52 |
| Rv0540/- | (cc=0.4504) | info on Rv0540/- |
| Rv0578c/PE_PGRS7 | (cc=0.4456) | info on Rv0578c/PE_PGRS7 |
| Rv0546c/- | (cc=0.4453) | info on Rv0546c/- |
| Rv1071c/echA9 | (cc=0.4413) | info on Rv1071c/echA9 |
| Rv0621/- | (cc=0.4403) | info on Rv0621/- |
| Rv0755c/PPE12 | (cc=0.4396) | info on Rv0755c/PPE12 |
Correlation of Rv1042c/- with Rv0578c/PE_PGRS7
Normalized LFCs for Rv1042c/-:
(description and provenance of datasets)
| Rv1042c/- | Rv0578c/PE_PGRS7 | |
| Fe_supp_jason_reseq | -1.46 | -2.133 |
| low_pH_jason_reseq | -1.064 | -0.806 |
| NO_jason_reseq | -0.78 | -0.99 |
| B6_jason_reseq | 0.796 | -0.628 |
| MHCII_jason_reseq | 0.763 | -0.418 |
| Isoniazid02 | 0.451 | -0.735 |
| Rifampicin4 | 1.914 | 0.42 |
| Ethambutol3 | 0.814 | 1.592 |
| Meropenem3 | 0.994 | 0.944 |
| Vancomycin16 | 1.292 | -0.271 |
| Rv2680_day32 | -0.571 | 0.172 |
| H37Rv_KO_MarP | -0.032 | 0.574 |
| hypoxia_3wks | 1.049 | -0.231 |
| hypoxia_6wks | 1.33 | -0.808 |
| glycerol | 0.168 | 0.238 |
| cholesterol | 0.131 | 0.276 |
| AJ | 0.734 | 0.983 |
| Bibs02 | 0.372 | 0.588 |
| Bibs02c | 1.84 | 0.828 |
| BL6 | -0.98 | -1.265 |
| BL6a | 1.413 | -0.739 |
| BXD01 | -0.009 | -0.89 |
| BXD010 | 0.413 | -0.64 |
| BXD011 | -0.323 | -0.87 |
| BXD03 | 0.618 | -0.464 |
| BXD04 | -0.744 | -0.796 |
| BXD05 | 0.39 | -0.386 |
| BXD06 | 0.075 | -1.211 |
| BXD07 | 0.171 | -0.788 |
| BXD08 | -0.8 | 0.107 |
| BXD09 | 0.32 | -0.702 |
| CAST | 0.692 | 0.095 |
| CCcont | -1.018 | -1.146 |
| DS01 | 1.09 | -0.101 |
| DS02 | 0.922 | 0.175 |
| DS04 | 0.188 | 0.624 |
| DS0c | 0.592 | -0.14 |
| GP01 | -2.405 | -0.31 |
| GP02 | -0.64 | -0.054 |
| GP0c | -0.317 | -0.113 |
| NOD | 1.866 | -0.583 |
| NZO | 0.058 | 0.0 |
| PWK | 0.915 | 0.269 |
| H37Rv_KO_CtpC | 3.218 | -0.511 |
| H37Rv_KO_CtpD | 1.339 | 0.606 |
| H37Rv_KO_Rv1272 | 0.01 | 0.141 |
| H37Rv_KO_SugABC | -1.494 | -0.37 |
| H37Rv_KO_MbtN | 0.877 | -0.481 |
| Trans05 | 0.698 | -0.056 |
| macrophage_unactivated | -1.932 | -1.891 |
| IL1 | -0.033 | -2.186 |
| Rapamycin | 0.034 | -2.569 |
| Tcell | -0.551 | -2.098 |
| GMCSF | -0.383 | -1.251 |
| IFNab | -0.692 | -2.851 |
| IFNg | -1.187 | -2.376 |
| IFNg_GMCSF1 | -0.962 | -1.882 |
| Rv1432_day32 | 0.868 | 1.064 |
| Rv1565c_day32 | 0.485 | -0.182 |
| secA2_input | 1.481 | 0.814 |
| delta_Rv3594 | 0.239 | 0.142 |
| delta_Rv3717 | 1.402 | -0.232 |
| delta_Rv3811 | 0.824 | -0.375 |
| delta_Rv0954 | 0.899 | -0.544 |
| PonA1 | -0.431 | -0.091 |
| EccD1_KO | 1.095 | -0.237 |
| EspI_KO | 1.315 | -0.536 |
| PE35_KO | 1.423 | -0.607 |
| PPE68_KO | 1.689 | -0.602 |
| glycerol2 | -0.495 | -1.852 |
| lignocerate | -0.631 | -2.21 |
| oleate | -0.038 | -1.528 |
| phosphatidylcholine | -0.242 | -1.852 |
| acetate | 0.0 | -2.135 |
| glucAc | 0.082 | -1.532 |
| Rv0950ko | 0.597 | -0.133 |
| Rv1096ko | 1.252 | 0.718 |
| Rv3684ko | -0.239 | 0.534 |
| delta_otsA_trehalose | -1.073 | -0.341 |