Top 10 genes with highest correlation to Rv1033c/trcR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1429/- | (cc=0.5261) | info on Rv1429/- |
| Rv3520c/- | (cc=0.5121) | info on Rv3520c/- |
| Rv1163/narJ | (cc=0.4917) | info on Rv1163/narJ |
| Rv0886/fprB | (cc=0.4617) | info on Rv0886/fprB |
| Rv3766/- | (cc=0.4611) | info on Rv3766/- |
| Rv1646/PE17 | (cc=0.4485) | info on Rv1646/PE17 |
| Rv0634c/- | (cc=0.4459) | info on Rv0634c/- |
| Rv3056/dinP | (cc=0.4436) | info on Rv3056/dinP |
| Rv3322c/- | (cc=0.4433) | info on Rv3322c/- |
| Rv3295/- | (cc=0.4414) | info on Rv3295/- |
Correlation of Rv1033c/trcR with Rv3056/dinP
Normalized LFCs for Rv1033c/trcR:
(description and provenance of datasets)
| Rv1033c/trcR | Rv3056/dinP | |
| Fe_supp_jason_reseq | 0.638 | -0.327 |
| low_pH_jason_reseq | -0.097 | -1.154 |
| NO_jason_reseq | 0.827 | -0.218 |
| B6_jason_reseq | 0.15 | 0.0 |
| MHCII_jason_reseq | 0.557 | 0.432 |
| Isoniazid02 | -0.096 | 0.92 |
| Rifampicin4 | -0.219 | 0.084 |
| Ethambutol3 | -0.092 | 1.536 |
| Meropenem3 | -0.151 | 0.037 |
| Vancomycin16 | 0.0 | -0.236 |
| Rv2680_day32 | -0.043 | -0.788 |
| H37Rv_KO_MarP | 0.391 | 0.779 |
| hypoxia_3wks | -0.108 | -0.275 |
| hypoxia_6wks | -0.931 | -0.925 |
| glycerol | 0.199 | -0.253 |
| cholesterol | 0.877 | -0.01 |
| AJ | 1.103 | 0.669 |
| Bibs02 | 0.246 | -0.132 |
| Bibs02c | 0.746 | -0.196 |
| BL6 | -0.694 | -0.592 |
| BL6a | 0.474 | -0.738 |
| BXD01 | -0.088 | -0.458 |
| BXD010 | -0.299 | -0.971 |
| BXD011 | -0.165 | -0.851 |
| BXD03 | 0.296 | -0.595 |
| BXD04 | 0.273 | -0.159 |
| BXD05 | 0.054 | -0.994 |
| BXD06 | -0.392 | -0.886 |
| BXD07 | -0.066 | -1.151 |
| BXD08 | 0.068 | -0.824 |
| BXD09 | 0.004 | -0.978 |
| CAST | -0.339 | -0.057 |
| CCcont | 0.168 | -0.83 |
| DS01 | 0.45 | 0.017 |
| DS02 | 0.25 | -0.326 |
| DS04 | -0.271 | 0.204 |
| DS0c | 0.231 | -0.259 |
| GP01 | -0.487 | -0.406 |
| GP02 | 0.251 | 0.283 |
| GP0c | -0.201 | -0.184 |
| NOD | 0.356 | 0.042 |
| NZO | 1.273 | 0.459 |
| PWK | -0.567 | 0.286 |
| H37Rv_KO_CtpC | -0.292 | 0.209 |
| H37Rv_KO_CtpD | -0.036 | -0.339 |
| H37Rv_KO_Rv1272 | -0.34 | -0.615 |
| H37Rv_KO_SugABC | 0.324 | 0.404 |
| H37Rv_KO_MbtN | -0.824 | 0.209 |
| Trans05 | -0.804 | -0.24 |
| macrophage_unactivated | 0.114 | -0.745 |
| IL1 | -0.362 | -1.186 |
| Rapamycin | -0.028 | -1.096 |
| Tcell | -0.196 | -0.57 |
| GMCSF | -0.533 | -1.65 |
| IFNab | -0.565 | -1.37 |
| IFNg | -0.783 | -0.799 |
| IFNg_GMCSF1 | 0.085 | 0.104 |
| Rv1432_day32 | 0.0 | -0.159 |
| Rv1565c_day32 | 0.332 | -0.03 |
| secA2_input | -0.535 | 0.371 |
| delta_Rv3594 | 0.236 | -0.242 |
| delta_Rv3717 | -0.549 | -0.21 |
| delta_Rv3811 | -0.361 | -0.062 |
| delta_Rv0954 | 0.336 | 0.784 |
| PonA1 | 0.04 | 0.435 |
| EccD1_KO | 0.059 | 1.072 |
| EspI_KO | 0.662 | 0.702 |
| PE35_KO | 0.309 | 0.26 |
| PPE68_KO | 0.538 | 0.419 |
| glycerol2 | 0.996 | 1.578 |
| lignocerate | 0.654 | 0.992 |
| oleate | 0.936 | 0.403 |
| phosphatidylcholine | 0.766 | 1.448 |
| acetate | -0.238 | 0.128 |
| glucAc | 0.267 | 0.08 |
| Rv0950ko | 0.814 | -0.289 |
| Rv1096ko | 0.374 | 0.287 |
| Rv3684ko | 0.262 | 0.537 |
| delta_otsA_trehalose | 0.278 | -0.387 |