Top 10 genes with highest correlation to Rv1033c/trcR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1429/- | (cc=0.5261) | info on Rv1429/- |
| Rv3520c/- | (cc=0.5121) | info on Rv3520c/- |
| Rv1163/narJ | (cc=0.4917) | info on Rv1163/narJ |
| Rv0886/fprB | (cc=0.4617) | info on Rv0886/fprB |
| Rv3766/- | (cc=0.4611) | info on Rv3766/- |
| Rv1646/PE17 | (cc=0.4485) | info on Rv1646/PE17 |
| Rv0634c/- | (cc=0.4459) | info on Rv0634c/- |
| Rv3056/dinP | (cc=0.4436) | info on Rv3056/dinP |
| Rv3322c/- | (cc=0.4433) | info on Rv3322c/- |
| Rv3295/- | (cc=0.4414) | info on Rv3295/- |
Correlation of Rv1033c/trcR with Rv0634c/-
Normalized LFCs for Rv1033c/trcR:
(description and provenance of datasets)
| Rv1033c/trcR | Rv0634c/- | |
| Fe_supp_jason_reseq | 0.638 | 0.949 |
| low_pH_jason_reseq | -0.097 | -0.85 |
| NO_jason_reseq | 0.827 | -0.299 |
| B6_jason_reseq | 0.15 | 0.546 |
| MHCII_jason_reseq | 0.557 | 0.989 |
| Isoniazid02 | -0.096 | 0.106 |
| Rifampicin4 | -0.219 | -0.642 |
| Ethambutol3 | -0.092 | -0.068 |
| Meropenem3 | -0.151 | -0.042 |
| Vancomycin16 | 0.0 | 0.037 |
| Rv2680_day32 | -0.043 | -1.995 |
| H37Rv_KO_MarP | 0.391 | 0.165 |
| hypoxia_3wks | -0.108 | -0.259 |
| hypoxia_6wks | -0.931 | -1.508 |
| glycerol | 0.199 | -0.042 |
| cholesterol | 0.877 | -0.213 |
| AJ | 1.103 | 0.108 |
| Bibs02 | 0.246 | -0.13 |
| Bibs02c | 0.746 | 0.637 |
| BL6 | -0.694 | -1.121 |
| BL6a | 0.474 | 0.072 |
| BXD01 | -0.088 | -1.183 |
| BXD010 | -0.299 | -1.041 |
| BXD011 | -0.165 | -0.57 |
| BXD03 | 0.296 | -0.373 |
| BXD04 | 0.273 | -1.034 |
| BXD05 | 0.054 | -0.592 |
| BXD06 | -0.392 | -0.995 |
| BXD07 | -0.066 | -1.59 |
| BXD08 | 0.068 | -1.243 |
| BXD09 | 0.004 | -1.313 |
| CAST | -0.339 | 0.165 |
| CCcont | 0.168 | -0.342 |
| DS01 | 0.45 | 0.433 |
| DS02 | 0.25 | -0.23 |
| DS04 | -0.271 | 0.129 |
| DS0c | 0.231 | 0.437 |
| GP01 | -0.487 | -1.303 |
| GP02 | 0.251 | -1.053 |
| GP0c | -0.201 | -0.68 |
| NOD | 0.356 | 0.472 |
| NZO | 1.273 | -0.13 |
| PWK | -0.567 | -0.926 |
| H37Rv_KO_CtpC | -0.292 | -1.32 |
| H37Rv_KO_CtpD | -0.036 | -0.619 |
| H37Rv_KO_Rv1272 | -0.34 | -0.935 |
| H37Rv_KO_SugABC | 0.324 | -0.59 |
| H37Rv_KO_MbtN | -0.824 | 0.217 |
| Trans05 | -0.804 | -0.007 |
| macrophage_unactivated | 0.114 | 0.123 |
| IL1 | -0.362 | -1.163 |
| Rapamycin | -0.028 | -0.442 |
| Tcell | -0.196 | -0.13 |
| GMCSF | -0.533 | -0.528 |
| IFNab | -0.565 | 0.342 |
| IFNg | -0.783 | -0.914 |
| IFNg_GMCSF1 | 0.085 | -0.628 |
| Rv1432_day32 | 0.0 | -1.913 |
| Rv1565c_day32 | 0.332 | -0.139 |
| secA2_input | -0.535 | -1.509 |
| delta_Rv3594 | 0.236 | -0.285 |
| delta_Rv3717 | -0.549 | -0.623 |
| delta_Rv3811 | -0.361 | -0.81 |
| delta_Rv0954 | 0.336 | 0.199 |
| PonA1 | 0.04 | 1.121 |
| EccD1_KO | 0.059 | 0.368 |
| EspI_KO | 0.662 | 0.214 |
| PE35_KO | 0.309 | 0.82 |
| PPE68_KO | 0.538 | 0.093 |
| glycerol2 | 0.996 | 0.298 |
| lignocerate | 0.654 | 0.183 |
| oleate | 0.936 | 0.292 |
| phosphatidylcholine | 0.766 | 0.171 |
| acetate | -0.238 | 0.078 |
| glucAc | 0.267 | -0.308 |
| Rv0950ko | 0.814 | -0.464 |
| Rv1096ko | 0.374 | -0.718 |
| Rv3684ko | 0.262 | -0.57 |
| delta_otsA_trehalose | 0.278 | 0.595 |