Top 10 genes with highest correlation to Rv1033c/trcR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1429/- | (cc=0.5261) | info on Rv1429/- |
| Rv3520c/- | (cc=0.5121) | info on Rv3520c/- |
| Rv1163/narJ | (cc=0.4917) | info on Rv1163/narJ |
| Rv0886/fprB | (cc=0.4617) | info on Rv0886/fprB |
| Rv3766/- | (cc=0.4611) | info on Rv3766/- |
| Rv1646/PE17 | (cc=0.4485) | info on Rv1646/PE17 |
| Rv0634c/- | (cc=0.4459) | info on Rv0634c/- |
| Rv3056/dinP | (cc=0.4436) | info on Rv3056/dinP |
| Rv3322c/- | (cc=0.4433) | info on Rv3322c/- |
| Rv3295/- | (cc=0.4414) | info on Rv3295/- |
Correlation of Rv1033c/trcR with Rv1429/-
Normalized LFCs for Rv1033c/trcR:
(description and provenance of datasets)
| Rv1033c/trcR | Rv1429/- | |
| Fe_supp_jason_reseq | 0.638 | 0.548 |
| low_pH_jason_reseq | -0.097 | -0.415 |
| NO_jason_reseq | 0.827 | 0.142 |
| B6_jason_reseq | 0.15 | 0.463 |
| MHCII_jason_reseq | 0.557 | 0.589 |
| Isoniazid02 | -0.096 | -0.314 |
| Rifampicin4 | -0.219 | 0.049 |
| Ethambutol3 | -0.092 | -0.251 |
| Meropenem3 | -0.151 | -0.722 |
| Vancomycin16 | 0.0 | -0.199 |
| Rv2680_day32 | -0.043 | -0.481 |
| H37Rv_KO_MarP | 0.391 | 0.728 |
| hypoxia_3wks | -0.108 | -0.439 |
| hypoxia_6wks | -0.931 | -0.407 |
| glycerol | 0.199 | -0.59 |
| cholesterol | 0.877 | -0.744 |
| AJ | 1.103 | 0.094 |
| Bibs02 | 0.246 | -0.019 |
| Bibs02c | 0.746 | -0.182 |
| BL6 | -0.694 | -0.621 |
| BL6a | 0.474 | -0.276 |
| BXD01 | -0.088 | -0.636 |
| BXD010 | -0.299 | -0.523 |
| BXD011 | -0.165 | 0.197 |
| BXD03 | 0.296 | -0.279 |
| BXD04 | 0.273 | 0.727 |
| BXD05 | 0.054 | -0.007 |
| BXD06 | -0.392 | -0.708 |
| BXD07 | -0.066 | -0.081 |
| BXD08 | 0.068 | 0.169 |
| BXD09 | 0.004 | -0.373 |
| CAST | -0.339 | 0.239 |
| CCcont | 0.168 | -0.899 |
| DS01 | 0.45 | -0.286 |
| DS02 | 0.25 | -0.547 |
| DS04 | -0.271 | 0.53 |
| DS0c | 0.231 | 0.121 |
| GP01 | -0.487 | -0.977 |
| GP02 | 0.251 | -0.177 |
| GP0c | -0.201 | -0.869 |
| NOD | 0.356 | 0.034 |
| NZO | 1.273 | 0.698 |
| PWK | -0.567 | -0.628 |
| H37Rv_KO_CtpC | -0.292 | 0.424 |
| H37Rv_KO_CtpD | -0.036 | 0.246 |
| H37Rv_KO_Rv1272 | -0.34 | -1.513 |
| H37Rv_KO_SugABC | 0.324 | 0.079 |
| H37Rv_KO_MbtN | -0.824 | -0.785 |
| Trans05 | -0.804 | -0.363 |
| macrophage_unactivated | 0.114 | -0.227 |
| IL1 | -0.362 | -0.166 |
| Rapamycin | -0.028 | 0.233 |
| Tcell | -0.196 | -0.209 |
| GMCSF | -0.533 | -0.042 |
| IFNab | -0.565 | -0.638 |
| IFNg | -0.783 | -0.444 |
| IFNg_GMCSF1 | 0.085 | -0.305 |
| Rv1432_day32 | 0.0 | 0.274 |
| Rv1565c_day32 | 0.332 | 0.006 |
| secA2_input | -0.535 | -0.016 |
| delta_Rv3594 | 0.236 | 0.044 |
| delta_Rv3717 | -0.549 | -0.486 |
| delta_Rv3811 | -0.361 | 0.128 |
| delta_Rv0954 | 0.336 | 0.556 |
| PonA1 | 0.04 | 0.763 |
| EccD1_KO | 0.059 | 0.385 |
| EspI_KO | 0.662 | 1.252 |
| PE35_KO | 0.309 | 0.866 |
| PPE68_KO | 0.538 | 0.688 |
| glycerol2 | 0.996 | 1.389 |
| lignocerate | 0.654 | -0.117 |
| oleate | 0.936 | 0.447 |
| phosphatidylcholine | 0.766 | 0.969 |
| acetate | -0.238 | -0.143 |
| glucAc | 0.267 | -0.379 |
| Rv0950ko | 0.814 | 0.431 |
| Rv1096ko | 0.374 | 0.347 |
| Rv3684ko | 0.262 | 0.098 |
| delta_otsA_trehalose | 0.278 | 0.051 |