Top 10 genes with highest correlation to Rv1027c/kdpE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1289/- | (cc=0.5276) | info on Rv1289/- |
| Rv2587c/secD | (cc=0.5239) | info on Rv2587c/secD |
| Rv0564c/gpdA1 | (cc=0.5064) | info on Rv0564c/gpdA1 |
| Rv2006/otsB1 | (cc=0.4968) | info on Rv2006/otsB1 |
| Rv3217c/- | (cc=0.4966) | info on Rv3217c/- |
| Rv0789c/- | (cc=0.496) | info on Rv0789c/- |
| Rv1852/ureG | (cc=0.4907) | info on Rv1852/ureG |
| Rv1290A/- | (cc=0.484) | info on Rv1290A/- |
| Rv2307D/- | (cc=0.4835) | info on Rv2307D/- |
| Rv1331/- | (cc=0.4826) | info on Rv1331/- |
Correlation of Rv1027c/kdpE with Rv2307D/-
Normalized LFCs for Rv1027c/kdpE:
(description and provenance of datasets)
| Rv1027c/kdpE | Rv2307D/- | |
| Fe_supp_jason_reseq | 0.655 | -0.633 |
| low_pH_jason_reseq | 0.634 | 0.391 |
| NO_jason_reseq | 1.184 | -0.386 |
| B6_jason_reseq | 0.378 | 0.546 |
| MHCII_jason_reseq | 0.37 | 0.535 |
| Isoniazid02 | 0.105 | -0.396 |
| Rifampicin4 | 0.0 | 0.671 |
| Ethambutol3 | -0.14 | -0.142 |
| Meropenem3 | -0.138 | -1.211 |
| Vancomycin16 | 0.546 | -0.247 |
| Rv2680_day32 | -0.685 | -0.27 |
| H37Rv_KO_MarP | -0.059 | 0.621 |
| hypoxia_3wks | -1.156 | -1.324 |
| hypoxia_6wks | -1.361 | -0.326 |
| glycerol | -1.502 | -1.419 |
| cholesterol | 0.421 | -1.301 |
| AJ | 1.029 | -0.694 |
| Bibs02 | -0.739 | -0.454 |
| Bibs02c | 1.596 | 1.291 |
| BL6 | 1.279 | -0.41 |
| BL6a | 0.324 | 0.273 |
| BXD01 | -0.135 | -0.601 |
| BXD010 | -0.051 | -0.203 |
| BXD011 | -0.31 | -0.269 |
| BXD03 | -1.784 | -1.201 |
| BXD04 | -1.548 | -0.839 |
| BXD05 | -1.174 | -0.63 |
| BXD06 | -0.841 | -0.916 |
| BXD07 | -0.686 | -0.067 |
| BXD08 | -0.427 | -1.679 |
| BXD09 | -0.24 | -1.126 |
| CAST | 0.961 | 0.487 |
| CCcont | -0.439 | -0.053 |
| DS01 | -0.575 | -1.305 |
| DS02 | -0.583 | -0.028 |
| DS04 | -0.118 | -1.536 |
| DS0c | -1.614 | 0.119 |
| GP01 | 0.128 | -1.164 |
| GP02 | -0.939 | -0.682 |
| GP0c | 0.673 | -1.308 |
| NOD | 1.713 | 0.809 |
| NZO | -0.207 | -1.542 |
| PWK | -0.577 | -0.878 |
| H37Rv_KO_CtpC | -0.911 | -1.493 |
| H37Rv_KO_CtpD | 0.744 | -1.379 |
| H37Rv_KO_Rv1272 | 0.86 | 0.791 |
| H37Rv_KO_SugABC | 1.798 | -0.705 |
| H37Rv_KO_MbtN | 1.107 | -0.616 |
| Trans05 | 1.655 | -0.118 |
| macrophage_unactivated | 0.701 | 0.278 |
| IL1 | 1.094 | 0.033 |
| Rapamycin | 0.522 | 1.077 |
| Tcell | 1.352 | 0.968 |
| GMCSF | -0.89 | 0.119 |
| IFNab | -0.583 | 0.925 |
| IFNg | 1.668 | 1.302 |
| IFNg_GMCSF1 | 0.361 | 1.967 |
| Rv1432_day32 | 0.0 | 0.851 |
| Rv1565c_day32 | 0.0 | 0.646 |
| secA2_input | -0.576 | -1.007 |
| delta_Rv3594 | 0.119 | 0.072 |
| delta_Rv3717 | -0.788 | 0.815 |
| delta_Rv3811 | -0.644 | 0.507 |
| delta_Rv0954 | 1.111 | 0.943 |
| PonA1 | 0.923 | 0.875 |
| EccD1_KO | 1.733 | 1.549 |
| EspI_KO | 0.456 | 1.643 |
| PE35_KO | 1.45 | 0.965 |
| PPE68_KO | 1.961 | 0.873 |
| glycerol2 | 1.932 | 0.673 |
| lignocerate | 1.987 | 1.047 |
| oleate | 0.0 | 0.39 |
| phosphatidylcholine | 2.151 | 0.637 |
| acetate | 2.469 | 0.69 |
| glucAc | 2.243 | 1.024 |
| Rv0950ko | 0.684 | 0.498 |
| Rv1096ko | 1.279 | 0.1 |
| Rv3684ko | 0.439 | -0.999 |
| delta_otsA_trehalose | 2.358 | 0.102 |