Top 10 genes with highest correlation to Rv1027c/kdpE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1289/- | (cc=0.5276) | info on Rv1289/- |
| Rv2587c/secD | (cc=0.5239) | info on Rv2587c/secD |
| Rv0564c/gpdA1 | (cc=0.5064) | info on Rv0564c/gpdA1 |
| Rv2006/otsB1 | (cc=0.4968) | info on Rv2006/otsB1 |
| Rv3217c/- | (cc=0.4966) | info on Rv3217c/- |
| Rv0789c/- | (cc=0.496) | info on Rv0789c/- |
| Rv1852/ureG | (cc=0.4907) | info on Rv1852/ureG |
| Rv1290A/- | (cc=0.484) | info on Rv1290A/- |
| Rv2307D/- | (cc=0.4835) | info on Rv2307D/- |
| Rv1331/- | (cc=0.4826) | info on Rv1331/- |
Correlation of Rv1027c/kdpE with Rv1852/ureG
Normalized LFCs for Rv1027c/kdpE:
(description and provenance of datasets)
| Rv1027c/kdpE | Rv1852/ureG | |
| Fe_supp_jason_reseq | 0.655 | -0.595 |
| low_pH_jason_reseq | 0.634 | -1.722 |
| NO_jason_reseq | 1.184 | -0.507 |
| B6_jason_reseq | 0.378 | -2.156 |
| MHCII_jason_reseq | 0.37 | -2.675 |
| Isoniazid02 | 0.105 | 0.416 |
| Rifampicin4 | 0.0 | -0.349 |
| Ethambutol3 | -0.14 | 0.084 |
| Meropenem3 | -0.138 | 0.672 |
| Vancomycin16 | 0.546 | 0.0 |
| Rv2680_day32 | -0.685 | -2.715 |
| H37Rv_KO_MarP | -0.059 | 0.837 |
| hypoxia_3wks | -1.156 | -1.95 |
| hypoxia_6wks | -1.361 | -1.169 |
| glycerol | -1.502 | -0.844 |
| cholesterol | 0.421 | 0.341 |
| AJ | 1.029 | 0.449 |
| Bibs02 | -0.739 | -0.053 |
| Bibs02c | 1.596 | -0.497 |
| BL6 | 1.279 | 0.103 |
| BL6a | 0.324 | -1.808 |
| BXD01 | -0.135 | -1.786 |
| BXD010 | -0.051 | -2.505 |
| BXD011 | -0.31 | -0.67 |
| BXD03 | -1.784 | -0.738 |
| BXD04 | -1.548 | -1.434 |
| BXD05 | -1.174 | -0.359 |
| BXD06 | -0.841 | -1.859 |
| BXD07 | -0.686 | -1.841 |
| BXD08 | -0.427 | -0.832 |
| BXD09 | -0.24 | -1.404 |
| CAST | 0.961 | -0.108 |
| CCcont | -0.439 | -0.829 |
| DS01 | -0.575 | -1.711 |
| DS02 | -0.583 | -0.696 |
| DS04 | -0.118 | -0.637 |
| DS0c | -1.614 | 0.281 |
| GP01 | 0.128 | -1.354 |
| GP02 | -0.939 | -1.057 |
| GP0c | 0.673 | -1.728 |
| NOD | 1.713 | -1.679 |
| NZO | -0.207 | 0.451 |
| PWK | -0.577 | -0.176 |
| H37Rv_KO_CtpC | -0.911 | -1.598 |
| H37Rv_KO_CtpD | 0.744 | 0.105 |
| H37Rv_KO_Rv1272 | 0.86 | 0.293 |
| H37Rv_KO_SugABC | 1.798 | -0.825 |
| H37Rv_KO_MbtN | 1.107 | 0.029 |
| Trans05 | 1.655 | 0.727 |
| macrophage_unactivated | 0.701 | 0.581 |
| IL1 | 1.094 | -0.303 |
| Rapamycin | 0.522 | -0.313 |
| Tcell | 1.352 | -0.583 |
| GMCSF | -0.89 | -0.515 |
| IFNab | -0.583 | 1.016 |
| IFNg | 1.668 | -0.152 |
| IFNg_GMCSF1 | 0.361 | 0.842 |
| Rv1432_day32 | 0.0 | -0.18 |
| Rv1565c_day32 | 0.0 | 0.058 |
| secA2_input | -0.576 | 1.268 |
| delta_Rv3594 | 0.119 | 1.199 |
| delta_Rv3717 | -0.788 | 0.559 |
| delta_Rv3811 | -0.644 | 0.0 |
| delta_Rv0954 | 1.111 | 2.305 |
| PonA1 | 0.923 | -2.069 |
| EccD1_KO | 1.733 | -0.635 |
| EspI_KO | 0.456 | -0.319 |
| PE35_KO | 1.45 | 1.076 |
| PPE68_KO | 1.961 | -0.038 |
| glycerol2 | 1.932 | 3.213 |
| lignocerate | 1.987 | 3.973 |
| oleate | 0.0 | 0.196 |
| phosphatidylcholine | 2.151 | 3.169 |
| acetate | 2.469 | 3.498 |
| glucAc | 2.243 | 3.418 |
| Rv0950ko | 0.684 | -0.151 |
| Rv1096ko | 1.279 | 0.0 |
| Rv3684ko | 0.439 | 0.789 |
| delta_otsA_trehalose | 2.358 | 2.628 |