Top 10 genes with highest correlation to Rv1016c/lpqT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0170/mce1B | (cc=0.5752) | info on Rv0170/mce1B |
| Rv0173/lprK | (cc=0.5475) | info on Rv0173/lprK |
| Rv0174/mce1F | (cc=0.5249) | info on Rv0174/mce1F |
| Rv0169/mce1A | (cc=0.5221) | info on Rv0169/mce1A |
| Rv0172/mce1D | (cc=0.4956) | info on Rv0172/mce1D |
| Rv0167/yrbE1A | (cc=0.4854) | info on Rv0167/yrbE1A |
| Rv2721c/- | (cc=0.4841) | info on Rv2721c/- |
| Rv0171/mce1C | (cc=0.462) | info on Rv0171/mce1C |
| Rv2655c/- | (cc=0.4513) | info on Rv2655c/- |
| Rv0168/yrbE1B | (cc=0.4443) | info on Rv0168/yrbE1B |
Correlation of Rv1016c/lpqT with Rv0173/lprK
Normalized LFCs for Rv1016c/lpqT:
(description and provenance of datasets)
| Rv1016c/lpqT | Rv0173/lprK | |
| Fe_supp_jason_reseq | -0.751 | 0.56 |
| low_pH_jason_reseq | -0.187 | 0.276 |
| NO_jason_reseq | 1.502 | 2.326 |
| B6_jason_reseq | 0.581 | 0.3 |
| MHCII_jason_reseq | -0.292 | -1.601 |
| Isoniazid02 | -0.725 | -0.127 |
| Rifampicin4 | 1.283 | 2.044 |
| Ethambutol3 | 1.341 | 1.141 |
| Meropenem3 | 1.081 | 2.5 |
| Vancomycin16 | 0.767 | 2.327 |
| Rv2680_day32 | 0.81 | -0.318 |
| H37Rv_KO_MarP | 0.251 | 0.199 |
| hypoxia_3wks | 1.336 | 2.464 |
| hypoxia_6wks | 2.255 | 1.94 |
| glycerol | -0.367 | 0.282 |
| cholesterol | 0.544 | 1.124 |
| AJ | 0.324 | 0.361 |
| Bibs02 | -1.325 | -3.498 |
| Bibs02c | 0.618 | -2.828 |
| BL6 | 0.201 | 0.437 |
| BL6a | 1.083 | -1.324 |
| BXD01 | 0.226 | 0.896 |
| BXD010 | 0.884 | 0.418 |
| BXD011 | 0.759 | 0.448 |
| BXD03 | -0.496 | 0.851 |
| BXD04 | 0.704 | 0.589 |
| BXD05 | 0.778 | 0.6 |
| BXD06 | 0.478 | 0.227 |
| BXD07 | 0.935 | 1.731 |
| BXD08 | 0.251 | 0.309 |
| BXD09 | 0.92 | 0.997 |
| CAST | 1.517 | -0.771 |
| CCcont | 0.005 | 0.09 |
| DS01 | -0.183 | -3.119 |
| DS02 | -0.332 | -1.528 |
| DS04 | -0.337 | -0.124 |
| DS0c | 0.119 | -1.782 |
| GP01 | 0.462 | -1.4 |
| GP02 | -1.26 | -1.445 |
| GP0c | -0.357 | -0.735 |
| NOD | 0.804 | 0.049 |
| NZO | 0.594 | 0.519 |
| PWK | 0.46 | -1.688 |
| H37Rv_KO_CtpC | 0.232 | 0.028 |
| H37Rv_KO_CtpD | 0.752 | -0.192 |
| H37Rv_KO_Rv1272 | 0.148 | -0.775 |
| H37Rv_KO_SugABC | -0.446 | 1.175 |
| H37Rv_KO_MbtN | 0.15 | 0.079 |
| Trans05 | 0.199 | 1.319 |
| macrophage_unactivated | -1.001 | -0.568 |
| IL1 | -1.29 | -1.747 |
| Rapamycin | -0.918 | -1.433 |
| Tcell | -1.906 | -1.453 |
| GMCSF | 0.161 | 0.512 |
| IFNab | -0.284 | 0.505 |
| IFNg | 0.438 | 0.5 |
| IFNg_GMCSF1 | -0.063 | 0.302 |
| Rv1432_day32 | -0.126 | -0.572 |
| Rv1565c_day32 | 0.523 | -1.966 |
| secA2_input | 0.964 | 0.02 |
| delta_Rv3594 | 0.0 | -0.497 |
| delta_Rv3717 | 0.175 | 0.536 |
| delta_Rv3811 | 0.921 | -0.424 |
| delta_Rv0954 | 1.054 | -0.31 |
| PonA1 | 0.643 | -0.031 |
| EccD1_KO | 0.187 | -0.875 |
| EspI_KO | -0.168 | -0.473 |
| PE35_KO | -0.225 | -0.318 |
| PPE68_KO | 0.573 | -0.432 |
| glycerol2 | -1.041 | -1.03 |
| lignocerate | -1.24 | -3.766 |
| oleate | 0.535 | 0.173 |
| phosphatidylcholine | -0.634 | -1.595 |
| acetate | -0.274 | -0.71 |
| glucAc | -0.122 | -0.556 |
| Rv0950ko | 0.311 | 0.516 |
| Rv1096ko | -0.187 | 0.591 |
| Rv3684ko | 0.147 | 1.179 |
| delta_otsA_trehalose | 0.812 | 1.387 |