Top 10 genes with highest correlation to Rv1016c/lpqT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0170/mce1B | (cc=0.5752) | info on Rv0170/mce1B |
| Rv0173/lprK | (cc=0.5475) | info on Rv0173/lprK |
| Rv0174/mce1F | (cc=0.5249) | info on Rv0174/mce1F |
| Rv0169/mce1A | (cc=0.5221) | info on Rv0169/mce1A |
| Rv0172/mce1D | (cc=0.4956) | info on Rv0172/mce1D |
| Rv0167/yrbE1A | (cc=0.4854) | info on Rv0167/yrbE1A |
| Rv2721c/- | (cc=0.4841) | info on Rv2721c/- |
| Rv0171/mce1C | (cc=0.462) | info on Rv0171/mce1C |
| Rv2655c/- | (cc=0.4513) | info on Rv2655c/- |
| Rv0168/yrbE1B | (cc=0.4443) | info on Rv0168/yrbE1B |
Correlation of Rv1016c/lpqT with Rv0172/mce1D
Normalized LFCs for Rv1016c/lpqT:
(description and provenance of datasets)
| Rv1016c/lpqT | Rv0172/mce1D | |
| Fe_supp_jason_reseq | -0.751 | 0.494 |
| low_pH_jason_reseq | -0.187 | 0.942 |
| NO_jason_reseq | 1.502 | 2.326 |
| B6_jason_reseq | 0.581 | 0.236 |
| MHCII_jason_reseq | -0.292 | -0.915 |
| Isoniazid02 | -0.725 | -1.544 |
| Rifampicin4 | 1.283 | 1.638 |
| Ethambutol3 | 1.341 | 0.285 |
| Meropenem3 | 1.081 | 1.174 |
| Vancomycin16 | 0.767 | 1.125 |
| Rv2680_day32 | 0.81 | 0.036 |
| H37Rv_KO_MarP | 0.251 | 0.494 |
| hypoxia_3wks | 1.336 | 1.786 |
| hypoxia_6wks | 2.255 | 1.625 |
| glycerol | -0.367 | -0.856 |
| cholesterol | 0.544 | 0.313 |
| AJ | 0.324 | -0.134 |
| Bibs02 | -1.325 | -2.327 |
| Bibs02c | 0.618 | -2.543 |
| BL6 | 0.201 | 0.729 |
| BL6a | 1.083 | -0.946 |
| BXD01 | 0.226 | 0.643 |
| BXD010 | 0.884 | 0.201 |
| BXD011 | 0.759 | 0.468 |
| BXD03 | -0.496 | 0.722 |
| BXD04 | 0.704 | 0.686 |
| BXD05 | 0.778 | 0.515 |
| BXD06 | 0.478 | -0.318 |
| BXD07 | 0.935 | 0.764 |
| BXD08 | 0.251 | 0.006 |
| BXD09 | 0.92 | 0.98 |
| CAST | 1.517 | -1.18 |
| CCcont | 0.005 | 0.201 |
| DS01 | -0.183 | -3.042 |
| DS02 | -0.332 | -2.614 |
| DS04 | -0.337 | -0.652 |
| DS0c | 0.119 | -2.49 |
| GP01 | 0.462 | -1.38 |
| GP02 | -1.26 | -1.297 |
| GP0c | -0.357 | -0.704 |
| NOD | 0.804 | -0.314 |
| NZO | 0.594 | 0.996 |
| PWK | 0.46 | -1.404 |
| H37Rv_KO_CtpC | 0.232 | -0.765 |
| H37Rv_KO_CtpD | 0.752 | -0.05 |
| H37Rv_KO_Rv1272 | 0.148 | -0.018 |
| H37Rv_KO_SugABC | -0.446 | 0.329 |
| H37Rv_KO_MbtN | 0.15 | -0.281 |
| Trans05 | 0.199 | 0.011 |
| macrophage_unactivated | -1.001 | -0.193 |
| IL1 | -1.29 | -1.714 |
| Rapamycin | -0.918 | -1.596 |
| Tcell | -1.906 | -1.603 |
| GMCSF | 0.161 | 0.187 |
| IFNab | -0.284 | 0.366 |
| IFNg | 0.438 | 0.323 |
| IFNg_GMCSF1 | -0.063 | -0.324 |
| Rv1432_day32 | -0.126 | 0.162 |
| Rv1565c_day32 | 0.523 | -1.813 |
| secA2_input | 0.964 | -0.18 |
| delta_Rv3594 | 0.0 | 0.177 |
| delta_Rv3717 | 0.175 | 0.364 |
| delta_Rv3811 | 0.921 | -0.245 |
| delta_Rv0954 | 1.054 | 0.191 |
| PonA1 | 0.643 | 0.201 |
| EccD1_KO | 0.187 | 0.155 |
| EspI_KO | -0.168 | -0.302 |
| PE35_KO | -0.225 | -0.018 |
| PPE68_KO | 0.573 | 0.0 |
| glycerol2 | -1.041 | 0.121 |
| lignocerate | -1.24 | -2.221 |
| oleate | 0.535 | 0.855 |
| phosphatidylcholine | -0.634 | -0.546 |
| acetate | -0.274 | 0.904 |
| glucAc | -0.122 | 0.288 |
| Rv0950ko | 0.311 | 0.112 |
| Rv1096ko | -0.187 | -0.57 |
| Rv3684ko | 0.147 | 0.747 |
| delta_otsA_trehalose | 0.812 | -0.065 |