Top 10 genes with highest correlation to Rv1016c/lpqT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0170/mce1B | (cc=0.5752) | info on Rv0170/mce1B |
| Rv0173/lprK | (cc=0.5475) | info on Rv0173/lprK |
| Rv0174/mce1F | (cc=0.5249) | info on Rv0174/mce1F |
| Rv0169/mce1A | (cc=0.5221) | info on Rv0169/mce1A |
| Rv0172/mce1D | (cc=0.4956) | info on Rv0172/mce1D |
| Rv0167/yrbE1A | (cc=0.4854) | info on Rv0167/yrbE1A |
| Rv2721c/- | (cc=0.4841) | info on Rv2721c/- |
| Rv0171/mce1C | (cc=0.462) | info on Rv0171/mce1C |
| Rv2655c/- | (cc=0.4513) | info on Rv2655c/- |
| Rv0168/yrbE1B | (cc=0.4443) | info on Rv0168/yrbE1B |
Correlation of Rv1016c/lpqT with Rv0170/mce1B
Normalized LFCs for Rv1016c/lpqT:
(description and provenance of datasets)
| Rv1016c/lpqT | Rv0170/mce1B | |
| Fe_supp_jason_reseq | -0.751 | 0.458 |
| low_pH_jason_reseq | -0.187 | 0.862 |
| NO_jason_reseq | 1.502 | 2.426 |
| B6_jason_reseq | 0.581 | 0.122 |
| MHCII_jason_reseq | -0.292 | -2.28 |
| Isoniazid02 | -0.725 | -0.861 |
| Rifampicin4 | 1.283 | 1.562 |
| Ethambutol3 | 1.341 | 0.072 |
| Meropenem3 | 1.081 | 1.781 |
| Vancomycin16 | 0.767 | 1.714 |
| Rv2680_day32 | 0.81 | 0.268 |
| H37Rv_KO_MarP | 0.251 | 0.418 |
| hypoxia_3wks | 1.336 | 2.177 |
| hypoxia_6wks | 2.255 | 1.919 |
| glycerol | -0.367 | -1.172 |
| cholesterol | 0.544 | 0.647 |
| AJ | 0.324 | 0.013 |
| Bibs02 | -1.325 | -2.482 |
| Bibs02c | 0.618 | -0.564 |
| BL6 | 0.201 | -0.356 |
| BL6a | 1.083 | 0.023 |
| BXD01 | 0.226 | 1.134 |
| BXD010 | 0.884 | 0.841 |
| BXD011 | 0.759 | 0.853 |
| BXD03 | -0.496 | 0.691 |
| BXD04 | 0.704 | 0.777 |
| BXD05 | 0.778 | 0.947 |
| BXD06 | 0.478 | 0.129 |
| BXD07 | 0.935 | 1.051 |
| BXD08 | 0.251 | 0.89 |
| BXD09 | 0.92 | 1.169 |
| CAST | 1.517 | -1.243 |
| CCcont | 0.005 | -0.11 |
| DS01 | -0.183 | -3.107 |
| DS02 | -0.332 | -2.264 |
| DS04 | -0.337 | -2.115 |
| DS0c | 0.119 | -2.402 |
| GP01 | 0.462 | -1.666 |
| GP02 | -1.26 | -0.802 |
| GP0c | -0.357 | -0.521 |
| NOD | 0.804 | -1.303 |
| NZO | 0.594 | 1.91 |
| PWK | 0.46 | -1.566 |
| H37Rv_KO_CtpC | 0.232 | 0.165 |
| H37Rv_KO_CtpD | 0.752 | 0.136 |
| H37Rv_KO_Rv1272 | 0.148 | 0.375 |
| H37Rv_KO_SugABC | -0.446 | -0.145 |
| H37Rv_KO_MbtN | 0.15 | 0.382 |
| Trans05 | 0.199 | 0.629 |
| macrophage_unactivated | -1.001 | -0.559 |
| IL1 | -1.29 | -2.447 |
| Rapamycin | -0.918 | -2.124 |
| Tcell | -1.906 | -1.362 |
| GMCSF | 0.161 | -0.354 |
| IFNab | -0.284 | 0.088 |
| IFNg | 0.438 | -0.473 |
| IFNg_GMCSF1 | -0.063 | -1.232 |
| Rv1432_day32 | -0.126 | 0.387 |
| Rv1565c_day32 | 0.523 | -1.464 |
| secA2_input | 0.964 | -0.65 |
| delta_Rv3594 | 0.0 | 0.661 |
| delta_Rv3717 | 0.175 | -0.101 |
| delta_Rv3811 | 0.921 | 0.703 |
| delta_Rv0954 | 1.054 | 0.014 |
| PonA1 | 0.643 | 0.919 |
| EccD1_KO | 0.187 | 0.118 |
| EspI_KO | -0.168 | 0.337 |
| PE35_KO | -0.225 | 0.204 |
| PPE68_KO | 0.573 | 0.378 |
| glycerol2 | -1.041 | -0.881 |
| lignocerate | -1.24 | -3.396 |
| oleate | 0.535 | 0.472 |
| phosphatidylcholine | -0.634 | -1.409 |
| acetate | -0.274 | -0.893 |
| glucAc | -0.122 | -1.132 |
| Rv0950ko | 0.311 | 0.796 |
| Rv1096ko | -0.187 | 0.666 |
| Rv3684ko | 0.147 | 1.831 |
| delta_otsA_trehalose | 0.812 | -0.564 |