Top 10 genes with highest correlation to Rv1012/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2020c/- | (cc=0.5169) | info on Rv2020c/- |
| Rv3482c/- | (cc=0.4805) | info on Rv3482c/- |
| Rv0044c/- | (cc=0.4694) | info on Rv0044c/- |
| Rv0325/- | (cc=0.4644) | info on Rv0325/- |
| Rv2076c/- | (cc=0.4616) | info on Rv2076c/- |
| Rv2382c/mbtC | (cc=0.4565) | info on Rv2382c/mbtC |
| Rv2651c/- | (cc=0.4451) | info on Rv2651c/- |
| Rv2064/cobG | (cc=0.4387) | info on Rv2064/cobG |
| Rv1858/modB | (cc=0.4378) | info on Rv1858/modB |
| Rv1632c/- | (cc=0.4376) | info on Rv1632c/- |
Correlation of Rv1012/- with Rv0325/-
Normalized LFCs for Rv1012/-:
(description and provenance of datasets)
| Rv1012/- | Rv0325/- | |
| Fe_supp_jason_reseq | 1.274 | -0.933 |
| low_pH_jason_reseq | -0.572 | -0.1 |
| NO_jason_reseq | -0.714 | 0.459 |
| B6_jason_reseq | 1.353 | 0.812 |
| MHCII_jason_reseq | 0.593 | 0.663 |
| Isoniazid02 | 0.509 | 2.146 |
| Rifampicin4 | 0.441 | 0.0 |
| Ethambutol3 | 2.008 | 1.867 |
| Meropenem3 | 1.366 | 0.734 |
| Vancomycin16 | 0.528 | 0.196 |
| Rv2680_day32 | -2.215 | 0.179 |
| H37Rv_KO_MarP | -0.229 | 0.226 |
| hypoxia_3wks | -0.068 | 0.742 |
| hypoxia_6wks | 0.624 | 0.286 |
| glycerol | -0.044 | 0.048 |
| cholesterol | 0.682 | 0.406 |
| AJ | 0.903 | -0.04 |
| Bibs02 | -0.185 | 0.155 |
| Bibs02c | -0.418 | -0.755 |
| BL6 | 0.255 | -1.539 |
| BL6a | -1.511 | -0.966 |
| BXD01 | 0.0 | -0.567 |
| BXD010 | -0.502 | -1.32 |
| BXD011 | -1.364 | -0.328 |
| BXD03 | -1.125 | -1.245 |
| BXD04 | -1.287 | -1.3 |
| BXD05 | -1.78 | -1.341 |
| BXD06 | -0.385 | -0.854 |
| BXD07 | -0.286 | -1.477 |
| BXD08 | 0.18 | -0.473 |
| BXD09 | -0.435 | -1.507 |
| CAST | 1.155 | 0.138 |
| CCcont | 0.123 | -1.472 |
| DS01 | 1.03 | -0.151 |
| DS02 | 1.119 | -0.997 |
| DS04 | -0.197 | -0.471 |
| DS0c | 0.746 | 0.273 |
| GP01 | 0.403 | -1.378 |
| GP02 | -0.819 | -0.636 |
| GP0c | 0.236 | -0.421 |
| NOD | 0.408 | -0.099 |
| NZO | 0.776 | 0.156 |
| PWK | 0.834 | -0.004 |
| H37Rv_KO_CtpC | -0.65 | -0.961 |
| H37Rv_KO_CtpD | -1.724 | -0.729 |
| H37Rv_KO_Rv1272 | -0.632 | -1.118 |
| H37Rv_KO_SugABC | -0.218 | -0.529 |
| H37Rv_KO_MbtN | -0.797 | -0.872 |
| Trans05 | -0.872 | -0.003 |
| macrophage_unactivated | 1.095 | -0.735 |
| IL1 | 0.276 | -0.32 |
| Rapamycin | 0.199 | -0.694 |
| Tcell | 0.091 | 0.209 |
| GMCSF | 0.752 | 0.298 |
| IFNab | 0.03 | -0.263 |
| IFNg | 1.216 | -0.069 |
| IFNg_GMCSF1 | 0.204 | 0.16 |
| Rv1432_day32 | 0.08 | -0.11 |
| Rv1565c_day32 | -0.147 | 0.306 |
| secA2_input | -0.817 | -0.47 |
| delta_Rv3594 | -0.024 | -0.236 |
| delta_Rv3717 | 1.279 | 0.121 |
| delta_Rv3811 | -0.122 | 0.126 |
| delta_Rv0954 | 0.735 | 1.239 |
| PonA1 | 0.832 | 0.807 |
| EccD1_KO | 1.237 | -0.25 |
| EspI_KO | -0.471 | 0.117 |
| PE35_KO | 0.222 | -0.263 |
| PPE68_KO | -1.232 | -0.729 |
| glycerol2 | 1.516 | 0.678 |
| lignocerate | 1.241 | 0.183 |
| oleate | 0.142 | 0.872 |
| phosphatidylcholine | 1.053 | 0.657 |
| acetate | 0.77 | -0.374 |
| glucAc | 0.449 | -0.387 |
| Rv0950ko | -0.479 | 0.467 |
| Rv1096ko | -0.651 | -0.341 |
| Rv3684ko | -1.32 | -1.1 |
| delta_otsA_trehalose | 0.263 | -0.601 |