Top 10 genes with highest correlation to Rv1012/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2020c/- | (cc=0.5169) | info on Rv2020c/- |
| Rv3482c/- | (cc=0.4805) | info on Rv3482c/- |
| Rv0044c/- | (cc=0.4694) | info on Rv0044c/- |
| Rv0325/- | (cc=0.4644) | info on Rv0325/- |
| Rv2076c/- | (cc=0.4616) | info on Rv2076c/- |
| Rv2382c/mbtC | (cc=0.4565) | info on Rv2382c/mbtC |
| Rv2651c/- | (cc=0.4451) | info on Rv2651c/- |
| Rv2064/cobG | (cc=0.4387) | info on Rv2064/cobG |
| Rv1858/modB | (cc=0.4378) | info on Rv1858/modB |
| Rv1632c/- | (cc=0.4376) | info on Rv1632c/- |
Correlation of Rv1012/- with Rv2020c/-
Normalized LFCs for Rv1012/-:
(description and provenance of datasets)
| Rv1012/- | Rv2020c/- | |
| Fe_supp_jason_reseq | 1.274 | 1.801 |
| low_pH_jason_reseq | -0.572 | 0.343 |
| NO_jason_reseq | -0.714 | -0.438 |
| B6_jason_reseq | 1.353 | 1.448 |
| MHCII_jason_reseq | 0.593 | 1.462 |
| Isoniazid02 | 0.509 | 1.656 |
| Rifampicin4 | 0.441 | 0.512 |
| Ethambutol3 | 2.008 | 1.806 |
| Meropenem3 | 1.366 | 0.746 |
| Vancomycin16 | 0.528 | -0.103 |
| Rv2680_day32 | -2.215 | -1.054 |
| H37Rv_KO_MarP | -0.229 | 0.351 |
| hypoxia_3wks | -0.068 | -0.299 |
| hypoxia_6wks | 0.624 | 0.484 |
| glycerol | -0.044 | -0.437 |
| cholesterol | 0.682 | 0.072 |
| AJ | 0.903 | 0.069 |
| Bibs02 | -0.185 | -0.547 |
| Bibs02c | -0.418 | -0.429 |
| BL6 | 0.255 | -1.089 |
| BL6a | -1.511 | -1.458 |
| BXD01 | 0.0 | -0.319 |
| BXD010 | -0.502 | -1.62 |
| BXD011 | -1.364 | -1.033 |
| BXD03 | -1.125 | -1.037 |
| BXD04 | -1.287 | -0.026 |
| BXD05 | -1.78 | -0.895 |
| BXD06 | -0.385 | -0.709 |
| BXD07 | -0.286 | -1.046 |
| BXD08 | 0.18 | -1.052 |
| BXD09 | -0.435 | -0.929 |
| CAST | 1.155 | 0.017 |
| CCcont | 0.123 | -0.962 |
| DS01 | 1.03 | -0.648 |
| DS02 | 1.119 | -0.339 |
| DS04 | -0.197 | 0.561 |
| DS0c | 0.746 | -0.773 |
| GP01 | 0.403 | -0.625 |
| GP02 | -0.819 | -1.248 |
| GP0c | 0.236 | -1.388 |
| NOD | 0.408 | -0.384 |
| NZO | 0.776 | -0.257 |
| PWK | 0.834 | 0.222 |
| H37Rv_KO_CtpC | -0.65 | -2.687 |
| H37Rv_KO_CtpD | -1.724 | -1.012 |
| H37Rv_KO_Rv1272 | -0.632 | -0.968 |
| H37Rv_KO_SugABC | -0.218 | 0.194 |
| H37Rv_KO_MbtN | -0.797 | -0.997 |
| Trans05 | -0.872 | 0.578 |
| macrophage_unactivated | 1.095 | -0.729 |
| IL1 | 0.276 | 0.107 |
| Rapamycin | 0.199 | -1.169 |
| Tcell | 0.091 | -0.349 |
| GMCSF | 0.752 | 0.594 |
| IFNab | 0.03 | 0.036 |
| IFNg | 1.216 | 0.489 |
| IFNg_GMCSF1 | 0.204 | 0.773 |
| Rv1432_day32 | 0.08 | -0.317 |
| Rv1565c_day32 | -0.147 | 0.0 |
| secA2_input | -0.817 | -0.731 |
| delta_Rv3594 | -0.024 | -0.939 |
| delta_Rv3717 | 1.279 | -0.184 |
| delta_Rv3811 | -0.122 | -0.677 |
| delta_Rv0954 | 0.735 | -0.03 |
| PonA1 | 0.832 | -0.567 |
| EccD1_KO | 1.237 | -0.523 |
| EspI_KO | -0.471 | -0.334 |
| PE35_KO | 0.222 | 0.128 |
| PPE68_KO | -1.232 | -0.522 |
| glycerol2 | 1.516 | 0.689 |
| lignocerate | 1.241 | 0.362 |
| oleate | 0.142 | 0.736 |
| phosphatidylcholine | 1.053 | 0.398 |
| acetate | 0.77 | -0.096 |
| glucAc | 0.449 | -0.183 |
| Rv0950ko | -0.479 | 0.627 |
| Rv1096ko | -0.651 | 0.13 |
| Rv3684ko | -1.32 | -0.465 |
| delta_otsA_trehalose | 0.263 | 0.208 |