TnSeqCorr

Top 10 genes with highest correlation to Rv0994/moeA1:

update plotcorrelationlink to info on gene
Rv3005c/- (cc=0.8108) info on Rv3005c/-
Rv3717/- (cc=0.7731) info on Rv3717/-
Rv1220c/- (cc=0.6969) info on Rv1220c/-
Rv0436c/pssA (cc=0.652) info on Rv0436c/pssA
Rv1698/mctB (cc=0.6145) info on Rv1698/mctB
Rv1860/apa (cc=0.6086) info on Rv1860/apa
Rv0437c/psd (cc=0.599) info on Rv0437c/psd
Rv2525c/- (cc=0.5823) info on Rv2525c/-
Rv2363/amiA2 (cc=0.5705) info on Rv2363/amiA2
Rv3096/- (cc=0.5581) info on Rv3096/-

Correlation of Rv0994/moeA1 with Rv3096/-

Normalized LFCs for Rv0994/moeA1:
(description and provenance of datasets)
Rv0994/moeA1Rv3096/-
Fe_supp_jason_reseq

-0.559

0.136

low_pH_jason_reseq

-4.603

-0.211

NO_jason_reseq

-2.371

-0.677

B6_jason_reseq

-3.282

-0.203

MHCII_jason_reseq

-1.968

-0.252

Isoniazid02

1.762

-0.29

Rifampicin4

-6.0

-1.332

Ethambutol3

-0.683

-0.247

Meropenem3

-3.435

0.0

Vancomycin16

-6.0

-1.082

Rv2680_day32

-2.48

-0.655

H37Rv_KO_MarP

-4.936

-0.658

hypoxia_3wks

-3.537

-0.794

hypoxia_6wks

-4.475

0.129

glycerol

0.635

0.089

cholesterol

2.24

0.173

AJ

-3.387

-0.151

Bibs02

0.701

0.955

Bibs02c

0.771

0.267

BL6

-1.158

-0.275

BL6a

-1.995

0.194

BXD01

-2.963

-0.671

BXD010

-2.049

-0.366

BXD011

-2.485

-0.491

BXD03

-2.38

-0.359

BXD04

-2.412

0.047

BXD05

-2.625

-0.53

BXD06

-1.272

-0.655

BXD07

-3.024

-0.235

BXD08

-2.42

-0.202

BXD09

-2.741

-0.309

CAST

-3.684

-0.39

CCcont

0.079

-0.222

DS01

0.587

0.275

DS02

0.665

0.019

DS04

-0.245

0.589

DS0c

0.024

0.357

GP01

-1.998

-0.189

GP02

-1.817

-0.492

GP0c

-2.631

-0.326

NOD

-2.262

0.62

NZO

-3.891

0.184

PWK

-3.342

-0.462

H37Rv_KO_CtpC

-0.437

0.414

H37Rv_KO_CtpD

0.612

0.494

H37Rv_KO_Rv1272

-2.656

0.261

H37Rv_KO_SugABC

-1.744

1.089

H37Rv_KO_MbtN

-0.399

-0.411

Trans05

-1.797

0.759

macrophage_unactivated

-0.303

0.158

IL1

-1.186

0.012

Rapamycin

-0.779

-0.298

Tcell

-1.404

-0.241

GMCSF

-0.895

0.475

IFNab

-0.218

-0.012

IFNg

-2.205

-0.433

IFNg_GMCSF1

-2.341

0.145

Rv1432_day32

-3.139

-0.116

Rv1565c_day32

-2.019

-0.103

secA2_input

0.374

0.2

delta_Rv3594

-1.366

-0.015

delta_Rv3717

-0.999

-0.422

delta_Rv3811

-0.674

-0.097

delta_Rv0954

-0.508

0.483

PonA1

-0.454

0.093

EccD1_KO

0.776

0.276

EspI_KO

0.436

0.616

PE35_KO

0.977

0.233

PPE68_KO

0.79

0.214

glycerol2

0.914

0.513

lignocerate

-0.424

1.287

oleate

-0.315

0.234

phosphatidylcholine

-0.679

0.654

acetate

-0.178

0.494

glucAc

-0.229

0.876

Rv0950ko

0.377

0.25

Rv1096ko

0.666

0.35

Rv3684ko

-0.144

0.259

delta_otsA_trehalose

0.368

-0.241