TnSeqCorr

Top 10 genes with highest correlation to Rv0994/moeA1:

update plotcorrelationlink to info on gene
Rv3005c/- (cc=0.8108) info on Rv3005c/-
Rv3717/- (cc=0.7731) info on Rv3717/-
Rv1220c/- (cc=0.6969) info on Rv1220c/-
Rv0436c/pssA (cc=0.652) info on Rv0436c/pssA
Rv1698/mctB (cc=0.6145) info on Rv1698/mctB
Rv1860/apa (cc=0.6086) info on Rv1860/apa
Rv0437c/psd (cc=0.599) info on Rv0437c/psd
Rv2525c/- (cc=0.5823) info on Rv2525c/-
Rv2363/amiA2 (cc=0.5705) info on Rv2363/amiA2
Rv3096/- (cc=0.5581) info on Rv3096/-

Correlation of Rv0994/moeA1 with Rv1220c/-

Normalized LFCs for Rv0994/moeA1:
(description and provenance of datasets)
Rv0994/moeA1Rv1220c/-
Fe_supp_jason_reseq

-0.559

-0.745

low_pH_jason_reseq

-4.603

-2.752

NO_jason_reseq

-2.371

0.0

B6_jason_reseq

-3.282

-2.692

MHCII_jason_reseq

-1.968

-0.723

Isoniazid02

1.762

1.812

Rifampicin4

-6.0

-4.069

Ethambutol3

-0.683

1.948

Meropenem3

-3.435

-2.782

Vancomycin16

-6.0

-2.435

Rv2680_day32

-2.48

-2.519

H37Rv_KO_MarP

-4.936

-0.776

hypoxia_3wks

-3.537

-1.447

hypoxia_6wks

-4.475

-2.936

glycerol

0.635

0.301

cholesterol

2.24

1.507

AJ

-3.387

-1.185

Bibs02

0.701

0.502

Bibs02c

0.771

0.288

BL6

-1.158

0.0

BL6a

-1.995

-0.517

BXD01

-2.963

-2.216

BXD010

-2.049

-1.316

BXD011

-2.485

-1.837

BXD03

-2.38

-0.903

BXD04

-2.412

-0.936

BXD05

-2.625

-0.95

BXD06

-1.272

-1.241

BXD07

-3.024

-1.769

BXD08

-2.42

-2.061

BXD09

-2.741

-0.703

CAST

-3.684

-2.75

CCcont

0.079

0.686

DS01

0.587

0.429

DS02

0.665

0.135

DS04

-0.245

1.068

DS0c

0.024

0.596

GP01

-1.998

-0.483

GP02

-1.817

-0.747

GP0c

-2.631

-0.637

NOD

-2.262

-1.219

NZO

-3.891

-2.592

PWK

-3.342

-2.265

H37Rv_KO_CtpC

-0.437

0.712

H37Rv_KO_CtpD

0.612

1.402

H37Rv_KO_Rv1272

-2.656

-0.028

H37Rv_KO_SugABC

-1.744

0.103

H37Rv_KO_MbtN

-0.399

0.026

Trans05

-1.797

0.009

macrophage_unactivated

-0.303

1.616

IL1

-1.186

0.638

Rapamycin

-0.779

1.108

Tcell

-1.404

0.991

GMCSF

-0.895

0.525

IFNab

-0.218

0.695

IFNg

-2.205

-0.096

IFNg_GMCSF1

-2.341

-0.057

Rv1432_day32

-3.139

-2.325

Rv1565c_day32

-2.019

-1.087

secA2_input

0.374

1.187

delta_Rv3594

-1.366

0.731

delta_Rv3717

-0.999

0.797

delta_Rv3811

-0.674

1.514

delta_Rv0954

-0.508

-1.535

PonA1

-0.454

-2.917

EccD1_KO

0.776

0.059

EspI_KO

0.436

0.017

PE35_KO

0.977

-0.971

PPE68_KO

0.79

-0.349

glycerol2

0.914

-0.328

lignocerate

-0.424

-0.032

oleate

-0.315

-1.221

phosphatidylcholine

-0.679

-0.436

acetate

-0.178

0.495

glucAc

-0.229

0.37

Rv0950ko

0.377

-1.553

Rv1096ko

0.666

-0.51

Rv3684ko

-0.144

-1.637

delta_otsA_trehalose

0.368

1.258