TnSeqCorr

Top 10 genes with highest correlation to Rv0994/moeA1:

update plotcorrelationlink to info on gene
Rv3005c/- (cc=0.8108) info on Rv3005c/-
Rv3717/- (cc=0.7731) info on Rv3717/-
Rv1220c/- (cc=0.6969) info on Rv1220c/-
Rv0436c/pssA (cc=0.652) info on Rv0436c/pssA
Rv1698/mctB (cc=0.6145) info on Rv1698/mctB
Rv1860/apa (cc=0.6086) info on Rv1860/apa
Rv0437c/psd (cc=0.599) info on Rv0437c/psd
Rv2525c/- (cc=0.5823) info on Rv2525c/-
Rv2363/amiA2 (cc=0.5705) info on Rv2363/amiA2
Rv3096/- (cc=0.5581) info on Rv3096/-

Correlation of Rv0994/moeA1 with Rv1698/mctB

Normalized LFCs for Rv0994/moeA1:
(description and provenance of datasets)
Rv0994/moeA1Rv1698/mctB
Fe_supp_jason_reseq

-0.559

-0.325

low_pH_jason_reseq

-4.603

-2.212

NO_jason_reseq

-2.371

-1.935

B6_jason_reseq

-3.282

-1.606

MHCII_jason_reseq

-1.968

-0.8

Isoniazid02

1.762

1.136

Rifampicin4

-6.0

-4.172

Ethambutol3

-0.683

-0.365

Meropenem3

-3.435

-1.557

Vancomycin16

-6.0

-3.449

Rv2680_day32

-2.48

-0.512

H37Rv_KO_MarP

-4.936

-0.43

hypoxia_3wks

-3.537

-1.156

hypoxia_6wks

-4.475

-2.497

glycerol

0.635

0.0

cholesterol

2.24

1.784

AJ

-3.387

-0.393

Bibs02

0.701

0.574

Bibs02c

0.771

-1.117

BL6

-1.158

-0.467

BL6a

-1.995

-1.058

BXD01

-2.963

-0.695

BXD010

-2.049

-0.684

BXD011

-2.485

0.127

BXD03

-2.38

-0.407

BXD04

-2.412

0.0

BXD05

-2.625

-0.605

BXD06

-1.272

-0.226

BXD07

-3.024

-0.323

BXD08

-2.42

0.0

BXD09

-2.741

-0.155

CAST

-3.684

-0.537

CCcont

0.079

1.3

DS01

0.587

0.45

DS02

0.665

0.11

DS04

-0.245

-1.211

DS0c

0.024

0.762

GP01

-1.998

0.966

GP02

-1.817

0.743

GP0c

-2.631

1.161

NOD

-2.262

-1.01

NZO

-3.891

-1.246

PWK

-3.342

-1.047

H37Rv_KO_CtpC

-0.437

1.045

H37Rv_KO_CtpD

0.612

-0.215

H37Rv_KO_Rv1272

-2.656

-0.634

H37Rv_KO_SugABC

-1.744

-0.619

H37Rv_KO_MbtN

-0.399

0.0

Trans05

-1.797

0.459

macrophage_unactivated

-0.303

1.31

IL1

-1.186

-0.955

Rapamycin

-0.779

0.807

Tcell

-1.404

0.0

GMCSF

-0.895

-0.401

IFNab

-0.218

0.417

IFNg

-2.205

0.369

IFNg_GMCSF1

-2.341

0.148

Rv1432_day32

-3.139

-1.358

Rv1565c_day32

-2.019

-0.809

secA2_input

0.374

0.64

delta_Rv3594

-1.366

-0.577

delta_Rv3717

-0.999

-0.904

delta_Rv3811

-0.674

-0.842

delta_Rv0954

-0.508

-1.101

PonA1

-0.454

-1.066

EccD1_KO

0.776

-0.286

EspI_KO

0.436

-1.435

PE35_KO

0.977

0.394

PPE68_KO

0.79

-0.093

glycerol2

0.914

0.52

lignocerate

-0.424

-1.101

oleate

-0.315

-1.154

phosphatidylcholine

-0.679

-0.653

acetate

-0.178

0.042

glucAc

-0.229

-0.934

Rv0950ko

0.377

0.669

Rv1096ko

0.666

0.929

Rv3684ko

-0.144

-0.727

delta_otsA_trehalose

0.368

0.232