TnSeqCorr

Top 10 genes with highest correlation to Rv0994/moeA1:

update plotcorrelationlink to info on gene
Rv3005c/- (cc=0.8108) info on Rv3005c/-
Rv3717/- (cc=0.7731) info on Rv3717/-
Rv1220c/- (cc=0.6969) info on Rv1220c/-
Rv0436c/pssA (cc=0.652) info on Rv0436c/pssA
Rv1698/mctB (cc=0.6145) info on Rv1698/mctB
Rv1860/apa (cc=0.6086) info on Rv1860/apa
Rv0437c/psd (cc=0.599) info on Rv0437c/psd
Rv2525c/- (cc=0.5823) info on Rv2525c/-
Rv2363/amiA2 (cc=0.5705) info on Rv2363/amiA2
Rv3096/- (cc=0.5581) info on Rv3096/-

Correlation of Rv0994/moeA1 with Rv3005c/-

Normalized LFCs for Rv0994/moeA1:
(description and provenance of datasets)
Rv0994/moeA1Rv3005c/-
Fe_supp_jason_reseq

-0.559

-0.088

low_pH_jason_reseq

-4.603

-2.259

NO_jason_reseq

-2.371

-2.772

B6_jason_reseq

-3.282

-3.879

MHCII_jason_reseq

-1.968

-2.39

Isoniazid02

1.762

0.291

Rifampicin4

-6.0

-6.0

Ethambutol3

-0.683

-0.766

Meropenem3

-3.435

0.285

Vancomycin16

-6.0

-4.913

Rv2680_day32

-2.48

-2.801

H37Rv_KO_MarP

-4.936

-4.764

hypoxia_3wks

-3.537

-1.384

hypoxia_6wks

-4.475

-2.301

glycerol

0.635

-0.357

cholesterol

2.24

0.989

AJ

-3.387

-1.906

Bibs02

0.701

1.601

Bibs02c

0.771

1.646

BL6

-1.158

-1.841

BL6a

-1.995

0.28

BXD01

-2.963

-2.633

BXD010

-2.049

-2.398

BXD011

-2.485

-1.554

BXD03

-2.38

-1.044

BXD04

-2.412

-1.464

BXD05

-2.625

-1.981

BXD06

-1.272

-0.967

BXD07

-3.024

-1.59

BXD08

-2.42

-2.401

BXD09

-2.741

-2.209

CAST

-3.684

-2.012

CCcont

0.079

0.538

DS01

0.587

2.38

DS02

0.665

1.638

DS04

-0.245

1.84

DS0c

0.024

1.442

GP01

-1.998

-0.811

GP02

-1.817

-1.502

GP0c

-2.631

-1.493

NOD

-2.262

-1.627

NZO

-3.891

-3.135

PWK

-3.342

-2.185

H37Rv_KO_CtpC

-0.437

0.879

H37Rv_KO_CtpD

0.612

0.435

H37Rv_KO_Rv1272

-2.656

-0.673

H37Rv_KO_SugABC

-1.744

-0.651

H37Rv_KO_MbtN

-0.399

-0.061

Trans05

-1.797

-1.177

macrophage_unactivated

-0.303

-0.331

IL1

-1.186

-1.516

Rapamycin

-0.779

-0.948

Tcell

-1.404

-1.548

GMCSF

-0.895

-1.545

IFNab

-0.218

0.435

IFNg

-2.205

-1.563

IFNg_GMCSF1

-2.341

-2.083

Rv1432_day32

-3.139

-2.697

Rv1565c_day32

-2.019

-2.385

secA2_input

0.374

0.805

delta_Rv3594

-1.366

0.76

delta_Rv3717

-0.999

1.219

delta_Rv3811

-0.674

0.9

delta_Rv0954

-0.508

-0.097

PonA1

-0.454

1.933

EccD1_KO

0.776

-0.335

EspI_KO

0.436

0.382

PE35_KO

0.977

-0.35

PPE68_KO

0.79

-0.134

glycerol2

0.914

0.347

lignocerate

-0.424

-0.58

oleate

-0.315

-1.294

phosphatidylcholine

-0.679

-0.95

acetate

-0.178

-0.407

glucAc

-0.229

0.0

Rv0950ko

0.377

-0.039

Rv1096ko

0.666

0.1

Rv3684ko

-0.144

-0.904

delta_otsA_trehalose

0.368

0.463