Top 10 genes with highest correlation to Rv0983/pepD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2051c/ppm1 | (cc=0.5852) | info on Rv2051c/ppm1 |
| Rv0204c/- | (cc=0.5743) | info on Rv0204c/- |
| Rv1234/- | (cc=0.5123) | info on Rv1234/- |
| Rv1496/- | (cc=0.5089) | info on Rv1496/- |
| Rv3545c/cyp125 | (cc=0.493) | info on Rv3545c/cyp125 |
| Rv2734/- | (cc=0.472) | info on Rv2734/- |
| Rv3678c/- | (cc=0.468) | info on Rv3678c/- |
| Rv1159/pimE | (cc=0.4543) | info on Rv1159/pimE |
| Rv1456c/- | (cc=0.4494) | info on Rv1456c/- |
| Rv0126/treS | (cc=0.449) | info on Rv0126/treS |
Correlation of Rv0983/pepD with Rv1496/-
Normalized LFCs for Rv0983/pepD:
(description and provenance of datasets)
| Rv0983/pepD | Rv1496/- | |
| Fe_supp_jason_reseq | 0.856 | 1.225 |
| low_pH_jason_reseq | -0.873 | -0.172 |
| NO_jason_reseq | -0.299 | -0.462 |
| B6_jason_reseq | -1.908 | -1.166 |
| MHCII_jason_reseq | -2.166 | -1.939 |
| Isoniazid02 | -0.615 | 1.441 |
| Rifampicin4 | -2.226 | -0.379 |
| Ethambutol3 | 1.347 | 1.459 |
| Meropenem3 | 1.247 | 0.184 |
| Vancomycin16 | -0.761 | -0.289 |
| Rv2680_day32 | -1.273 | 0.208 |
| H37Rv_KO_MarP | -2.203 | -0.47 |
| hypoxia_3wks | -1.017 | 0.67 |
| hypoxia_6wks | -1.599 | -0.299 |
| glycerol | 0.686 | 0.186 |
| cholesterol | -0.097 | 0.81 |
| AJ | -0.361 | -1.002 |
| Bibs02 | -0.62 | -0.152 |
| Bibs02c | -2.47 | -1.061 |
| BL6 | 0.425 | 0.926 |
| BL6a | -0.627 | -0.271 |
| BXD01 | -0.358 | 0.692 |
| BXD010 | 0.118 | 1.726 |
| BXD011 | 0.099 | 0.963 |
| BXD03 | 0.0 | 0.867 |
| BXD04 | -0.288 | 2.068 |
| BXD05 | 0.74 | 0.953 |
| BXD06 | -0.258 | 0.514 |
| BXD07 | 0.188 | 0.875 |
| BXD08 | -0.481 | 1.377 |
| BXD09 | 0.248 | 0.786 |
| CAST | -1.49 | -0.584 |
| CCcont | 0.778 | 1.924 |
| DS01 | -0.963 | -1.138 |
| DS02 | -2.568 | -2.568 |
| DS04 | -0.413 | -1.436 |
| DS0c | -1.537 | -1.403 |
| GP01 | 0.031 | 2.198 |
| GP02 | -0.797 | 0.113 |
| GP0c | 0.515 | 1.915 |
| NOD | -0.308 | -1.453 |
| NZO | 0.406 | -1.118 |
| PWK | -0.131 | 0.122 |
| H37Rv_KO_CtpC | 1.691 | -0.379 |
| H37Rv_KO_CtpD | 0.324 | 1.685 |
| H37Rv_KO_Rv1272 | 0.999 | 0.324 |
| H37Rv_KO_SugABC | 0.476 | -0.641 |
| H37Rv_KO_MbtN | 0.196 | 1.89 |
| Trans05 | 0.021 | 0.882 |
| macrophage_unactivated | 1.108 | 0.319 |
| IL1 | 1.456 | 0.825 |
| Rapamycin | 1.077 | 1.126 |
| Tcell | 1.144 | 0.31 |
| GMCSF | 0.795 | 1.516 |
| IFNab | -0.538 | 0.538 |
| IFNg | 1.066 | 1.761 |
| IFNg_GMCSF1 | 1.049 | 0.789 |
| Rv1432_day32 | -2.351 | 0.0 |
| Rv1565c_day32 | -0.051 | 0.058 |
| secA2_input | 0.16 | -0.873 |
| delta_Rv3594 | -0.783 | -0.699 |
| delta_Rv3717 | -0.293 | -0.162 |
| delta_Rv3811 | -0.318 | 0.251 |
| delta_Rv0954 | 1.076 | -1.087 |
| PonA1 | 1.335 | 0.316 |
| EccD1_KO | 1.003 | 1.059 |
| EspI_KO | -0.165 | -0.513 |
| PE35_KO | -0.085 | 0.318 |
| PPE68_KO | 0.825 | 0.512 |
| glycerol2 | -0.511 | -0.509 |
| lignocerate | -1.118 | -0.061 |
| oleate | -1.394 | 0.323 |
| phosphatidylcholine | -0.993 | 0.141 |
| acetate | 0.241 | -0.042 |
| glucAc | 0.477 | -0.318 |
| Rv0950ko | 0.718 | 1.173 |
| Rv1096ko | 0.181 | 0.875 |
| Rv3684ko | 0.236 | 1.13 |
| delta_otsA_trehalose | -0.897 | 0.014 |