Top 10 genes with highest correlation to Rv0983/pepD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2051c/ppm1 | (cc=0.5852) | info on Rv2051c/ppm1 |
| Rv0204c/- | (cc=0.5743) | info on Rv0204c/- |
| Rv1234/- | (cc=0.5123) | info on Rv1234/- |
| Rv1496/- | (cc=0.5089) | info on Rv1496/- |
| Rv3545c/cyp125 | (cc=0.493) | info on Rv3545c/cyp125 |
| Rv2734/- | (cc=0.472) | info on Rv2734/- |
| Rv3678c/- | (cc=0.468) | info on Rv3678c/- |
| Rv1159/pimE | (cc=0.4543) | info on Rv1159/pimE |
| Rv1456c/- | (cc=0.4494) | info on Rv1456c/- |
| Rv0126/treS | (cc=0.449) | info on Rv0126/treS |
Correlation of Rv0983/pepD with Rv1234/-
Normalized LFCs for Rv0983/pepD:
(description and provenance of datasets)
| Rv0983/pepD | Rv1234/- | |
| Fe_supp_jason_reseq | 0.856 | -0.83 |
| low_pH_jason_reseq | -0.873 | 0.085 |
| NO_jason_reseq | -0.299 | 0.425 |
| B6_jason_reseq | -1.908 | -1.557 |
| MHCII_jason_reseq | -2.166 | -1.173 |
| Isoniazid02 | -0.615 | -1.133 |
| Rifampicin4 | -2.226 | -0.615 |
| Ethambutol3 | 1.347 | 0.134 |
| Meropenem3 | 1.247 | -1.329 |
| Vancomycin16 | -0.761 | -1.143 |
| Rv2680_day32 | -1.273 | -0.117 |
| H37Rv_KO_MarP | -2.203 | 0.488 |
| hypoxia_3wks | -1.017 | -1.878 |
| hypoxia_6wks | -1.599 | -1.349 |
| glycerol | 0.686 | -0.288 |
| cholesterol | -0.097 | 1.031 |
| AJ | -0.361 | -1.98 |
| Bibs02 | -0.62 | 0.522 |
| Bibs02c | -2.47 | -2.884 |
| BL6 | 0.425 | -1.376 |
| BL6a | -0.627 | -0.926 |
| BXD01 | -0.358 | -0.15 |
| BXD010 | 0.118 | -0.726 |
| BXD011 | 0.099 | 0.433 |
| BXD03 | 0.0 | -1.746 |
| BXD04 | -0.288 | 0.22 |
| BXD05 | 0.74 | -0.017 |
| BXD06 | -0.258 | -0.843 |
| BXD07 | 0.188 | 0.969 |
| BXD08 | -0.481 | 0.196 |
| BXD09 | 0.248 | 0.083 |
| CAST | -1.49 | -0.394 |
| CCcont | 0.778 | -0.132 |
| DS01 | -0.963 | -1.769 |
| DS02 | -2.568 | -0.468 |
| DS04 | -0.413 | -1.06 |
| DS0c | -1.537 | -1.912 |
| GP01 | 0.031 | 0.79 |
| GP02 | -0.797 | -0.833 |
| GP0c | 0.515 | 0.801 |
| NOD | -0.308 | -1.796 |
| NZO | 0.406 | -0.894 |
| PWK | -0.131 | -1.729 |
| H37Rv_KO_CtpC | 1.691 | 1.033 |
| H37Rv_KO_CtpD | 0.324 | -0.949 |
| H37Rv_KO_Rv1272 | 0.999 | 0.643 |
| H37Rv_KO_SugABC | 0.476 | 1.74 |
| H37Rv_KO_MbtN | 0.196 | -0.938 |
| Trans05 | 0.021 | 1.537 |
| macrophage_unactivated | 1.108 | 0.492 |
| IL1 | 1.456 | 1.934 |
| Rapamycin | 1.077 | 1.725 |
| Tcell | 1.144 | -0.42 |
| GMCSF | 0.795 | 2.339 |
| IFNab | -0.538 | 1.097 |
| IFNg | 1.066 | 3.375 |
| IFNg_GMCSF1 | 1.049 | 2.853 |
| Rv1432_day32 | -2.351 | -2.515 |
| Rv1565c_day32 | -0.051 | -2.132 |
| secA2_input | 0.16 | 1.057 |
| delta_Rv3594 | -0.783 | 0.052 |
| delta_Rv3717 | -0.293 | 0.147 |
| delta_Rv3811 | -0.318 | -0.134 |
| delta_Rv0954 | 1.076 | 1.39 |
| PonA1 | 1.335 | 0.343 |
| EccD1_KO | 1.003 | 1.289 |
| EspI_KO | -0.165 | 1.283 |
| PE35_KO | -0.085 | 0.551 |
| PPE68_KO | 0.825 | 0.899 |
| glycerol2 | -0.511 | -1.974 |
| lignocerate | -1.118 | -1.735 |
| oleate | -1.394 | -0.332 |
| phosphatidylcholine | -0.993 | -0.98 |
| acetate | 0.241 | -1.102 |
| glucAc | 0.477 | -2.014 |
| Rv0950ko | 0.718 | 0.908 |
| Rv1096ko | 0.181 | 0.371 |
| Rv3684ko | 0.236 | 1.831 |
| delta_otsA_trehalose | -0.897 | -0.058 |