Top 10 genes with highest correlation to Rv0961/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0849/- | (cc=0.562) | info on Rv0849/- |
| Rv0611c/- | (cc=0.5296) | info on Rv0611c/- |
| Rv2322c/rocD1 | (cc=0.4872) | info on Rv2322c/rocD1 |
| Rv1945/- | (cc=0.4853) | info on Rv1945/- |
| Rv0754/PE_PGRS11 | (cc=0.472) | info on Rv0754/PE_PGRS11 |
| Rv2489c/- | (cc=0.471) | info on Rv2489c/- |
| Rv3638/- | (cc=0.4608) | info on Rv3638/- |
| Rv0953c/- | (cc=0.4566) | info on Rv0953c/- |
| Rv1834/lipZ | (cc=0.4445) | info on Rv1834/lipZ |
| Rv1148c/- | (cc=0.4393) | info on Rv1148c/- |
Correlation of Rv0961/- with Rv3638/-
Normalized LFCs for Rv0961/-:
(description and provenance of datasets)
| Rv0961/- | Rv3638/- | |
| Fe_supp_jason_reseq | -1.44 | 0.081 |
| low_pH_jason_reseq | -1.327 | -0.144 |
| NO_jason_reseq | 0.252 | -0.139 |
| B6_jason_reseq | 0.284 | 0.405 |
| MHCII_jason_reseq | -0.008 | 0.936 |
| Isoniazid02 | -0.93 | -0.124 |
| Rifampicin4 | -1.248 | -0.585 |
| Ethambutol3 | -0.693 | -0.28 |
| Meropenem3 | -1.041 | -0.087 |
| Vancomycin16 | -0.517 | -0.096 |
| Rv2680_day32 | 2.182 | 1.23 |
| H37Rv_KO_MarP | 0.086 | 0.8 |
| hypoxia_3wks | -0.247 | -0.04 |
| hypoxia_6wks | 0.376 | 0.297 |
| glycerol | 0.145 | -3.169 |
| cholesterol | -0.027 | -1.042 |
| AJ | 0.297 | 0.037 |
| Bibs02 | -0.401 | 0.115 |
| Bibs02c | -0.014 | 0.045 |
| BL6 | -0.686 | -1.463 |
| BL6a | -0.709 | -0.251 |
| BXD01 | -0.066 | -0.507 |
| BXD010 | -1.218 | -1.283 |
| BXD011 | -0.753 | -0.76 |
| BXD03 | -1.092 | -0.637 |
| BXD04 | -0.919 | 0.181 |
| BXD05 | -0.984 | -0.669 |
| BXD06 | -0.388 | -0.399 |
| BXD07 | -0.689 | -0.507 |
| BXD08 | -0.175 | -0.72 |
| BXD09 | -1.253 | -0.514 |
| CAST | 0.44 | -0.377 |
| CCcont | -0.899 | -1.698 |
| DS01 | 0.513 | 0.243 |
| DS02 | -0.096 | 0.339 |
| DS04 | 2.204 | 0.55 |
| DS0c | 0.699 | 0.192 |
| GP01 | 1.139 | 0.797 |
| GP02 | 0.159 | -0.644 |
| GP0c | -0.189 | 0.062 |
| NOD | -0.129 | 0.153 |
| NZO | 0.351 | 0.374 |
| PWK | -0.05 | -0.121 |
| H37Rv_KO_CtpC | 0.199 | -0.632 |
| H37Rv_KO_CtpD | 0.696 | 0.04 |
| H37Rv_KO_Rv1272 | -1.431 | -0.187 |
| H37Rv_KO_SugABC | 0.426 | 0.418 |
| H37Rv_KO_MbtN | -0.523 | 0.044 |
| Trans05 | -0.296 | -0.335 |
| macrophage_unactivated | -0.439 | -1.297 |
| IL1 | -0.172 | -1.219 |
| Rapamycin | -0.301 | -1.016 |
| Tcell | 0.062 | -1.131 |
| GMCSF | -0.259 | -1.127 |
| IFNab | -1.255 | -1.001 |
| IFNg | -0.847 | -0.804 |
| IFNg_GMCSF1 | 0.817 | -0.446 |
| Rv1432_day32 | -0.18 | -0.789 |
| Rv1565c_day32 | 1.417 | 1.17 |
| secA2_input | -0.081 | -0.778 |
| delta_Rv3594 | -0.563 | -0.014 |
| delta_Rv3717 | -0.424 | -0.648 |
| delta_Rv3811 | -1.753 | -0.581 |
| delta_Rv0954 | 1.096 | 0.35 |
| PonA1 | -0.321 | 0.178 |
| EccD1_KO | 0.049 | -0.362 |
| EspI_KO | -0.043 | -0.371 |
| PE35_KO | 0.169 | 0.076 |
| PPE68_KO | 0.739 | 0.432 |
| glycerol2 | 0.391 | 0.015 |
| lignocerate | -0.14 | -0.627 |
| oleate | 0.604 | 0.092 |
| phosphatidylcholine | 0.161 | 0.207 |
| acetate | -0.944 | -0.559 |
| glucAc | -0.668 | -0.881 |
| Rv0950ko | -0.133 | -0.054 |
| Rv1096ko | 0.193 | 0.443 |
| Rv3684ko | -1.117 | -0.308 |
| delta_otsA_trehalose | 0.722 | 0.021 |