Top 10 genes with highest correlation to Rv0961/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0849/- | (cc=0.562) | info on Rv0849/- |
| Rv0611c/- | (cc=0.5296) | info on Rv0611c/- |
| Rv2322c/rocD1 | (cc=0.4872) | info on Rv2322c/rocD1 |
| Rv1945/- | (cc=0.4853) | info on Rv1945/- |
| Rv0754/PE_PGRS11 | (cc=0.472) | info on Rv0754/PE_PGRS11 |
| Rv2489c/- | (cc=0.471) | info on Rv2489c/- |
| Rv3638/- | (cc=0.4608) | info on Rv3638/- |
| Rv0953c/- | (cc=0.4566) | info on Rv0953c/- |
| Rv1834/lipZ | (cc=0.4445) | info on Rv1834/lipZ |
| Rv1148c/- | (cc=0.4393) | info on Rv1148c/- |
Correlation of Rv0961/- with Rv0754/PE_PGRS11
Normalized LFCs for Rv0961/-:
(description and provenance of datasets)
| Rv0961/- | Rv0754/PE_PGRS11 | |
| Fe_supp_jason_reseq | -1.44 | -0.499 |
| low_pH_jason_reseq | -1.327 | -0.475 |
| NO_jason_reseq | 0.252 | 0.068 |
| B6_jason_reseq | 0.284 | 0.63 |
| MHCII_jason_reseq | -0.008 | -0.045 |
| Isoniazid02 | -0.93 | -0.874 |
| Rifampicin4 | -1.248 | -0.43 |
| Ethambutol3 | -0.693 | -0.28 |
| Meropenem3 | -1.041 | -0.551 |
| Vancomycin16 | -0.517 | -0.822 |
| Rv2680_day32 | 2.182 | -0.473 |
| H37Rv_KO_MarP | 0.086 | 0.509 |
| hypoxia_3wks | -0.247 | 0.0 |
| hypoxia_6wks | 0.376 | 0.194 |
| glycerol | 0.145 | 0.758 |
| cholesterol | -0.027 | -0.019 |
| AJ | 0.297 | 0.03 |
| Bibs02 | -0.401 | 0.229 |
| Bibs02c | -0.014 | -0.13 |
| BL6 | -0.686 | -0.248 |
| BL6a | -0.709 | -0.413 |
| BXD01 | -0.066 | -0.299 |
| BXD010 | -1.218 | -0.797 |
| BXD011 | -0.753 | -0.314 |
| BXD03 | -1.092 | -0.663 |
| BXD04 | -0.919 | -0.548 |
| BXD05 | -0.984 | -0.717 |
| BXD06 | -0.388 | -0.197 |
| BXD07 | -0.689 | -0.747 |
| BXD08 | -0.175 | -0.372 |
| BXD09 | -1.253 | -0.769 |
| CAST | 0.44 | 0.19 |
| CCcont | -0.899 | -0.613 |
| DS01 | 0.513 | 0.06 |
| DS02 | -0.096 | 0.019 |
| DS04 | 2.204 | 0.545 |
| DS0c | 0.699 | -0.407 |
| GP01 | 1.139 | -0.098 |
| GP02 | 0.159 | 0.579 |
| GP0c | -0.189 | -0.673 |
| NOD | -0.129 | 0.085 |
| NZO | 0.351 | 0.481 |
| PWK | -0.05 | 0.115 |
| H37Rv_KO_CtpC | 0.199 | -0.064 |
| H37Rv_KO_CtpD | 0.696 | -0.488 |
| H37Rv_KO_Rv1272 | -1.431 | -0.043 |
| H37Rv_KO_SugABC | 0.426 | -0.413 |
| H37Rv_KO_MbtN | -0.523 | -0.276 |
| Trans05 | -0.296 | -0.314 |
| macrophage_unactivated | -0.439 | 0.259 |
| IL1 | -0.172 | 0.0 |
| Rapamycin | -0.301 | -0.267 |
| Tcell | 0.062 | 0.055 |
| GMCSF | -0.259 | -0.277 |
| IFNab | -1.255 | -0.103 |
| IFNg | -0.847 | -0.69 |
| IFNg_GMCSF1 | 0.817 | -0.163 |
| Rv1432_day32 | -0.18 | 0.566 |
| Rv1565c_day32 | 1.417 | 0.681 |
| secA2_input | -0.081 | 0.557 |
| delta_Rv3594 | -0.563 | -0.04 |
| delta_Rv3717 | -0.424 | -0.21 |
| delta_Rv3811 | -1.753 | 0.138 |
| delta_Rv0954 | 1.096 | 0.012 |
| PonA1 | -0.321 | 0.261 |
| EccD1_KO | 0.049 | 0.48 |
| EspI_KO | -0.043 | 0.0 |
| PE35_KO | 0.169 | 0.128 |
| PPE68_KO | 0.739 | 0.307 |
| glycerol2 | 0.391 | 0.972 |
| lignocerate | -0.14 | 0.704 |
| oleate | 0.604 | 0.992 |
| phosphatidylcholine | 0.161 | 1.007 |
| acetate | -0.944 | 0.066 |
| glucAc | -0.668 | 0.081 |
| Rv0950ko | -0.133 | -0.576 |
| Rv1096ko | 0.193 | -0.066 |
| Rv3684ko | -1.117 | -0.678 |
| delta_otsA_trehalose | 0.722 | 1.322 |