Top 10 genes with highest correlation to Rv0961/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0849/- | (cc=0.562) | info on Rv0849/- |
| Rv0611c/- | (cc=0.5296) | info on Rv0611c/- |
| Rv2322c/rocD1 | (cc=0.4872) | info on Rv2322c/rocD1 |
| Rv1945/- | (cc=0.4853) | info on Rv1945/- |
| Rv0754/PE_PGRS11 | (cc=0.472) | info on Rv0754/PE_PGRS11 |
| Rv2489c/- | (cc=0.471) | info on Rv2489c/- |
| Rv3638/- | (cc=0.4608) | info on Rv3638/- |
| Rv0953c/- | (cc=0.4566) | info on Rv0953c/- |
| Rv1834/lipZ | (cc=0.4445) | info on Rv1834/lipZ |
| Rv1148c/- | (cc=0.4393) | info on Rv1148c/- |
Correlation of Rv0961/- with Rv2322c/rocD1
Normalized LFCs for Rv0961/-:
(description and provenance of datasets)
| Rv0961/- | Rv2322c/rocD1 | |
| Fe_supp_jason_reseq | -1.44 | -0.286 |
| low_pH_jason_reseq | -1.327 | -1.819 |
| NO_jason_reseq | 0.252 | 0.52 |
| B6_jason_reseq | 0.284 | 1.266 |
| MHCII_jason_reseq | -0.008 | 1.341 |
| Isoniazid02 | -0.93 | -0.866 |
| Rifampicin4 | -1.248 | -1.305 |
| Ethambutol3 | -0.693 | -1.036 |
| Meropenem3 | -1.041 | -1.68 |
| Vancomycin16 | -0.517 | -1.0 |
| Rv2680_day32 | 2.182 | 0.517 |
| H37Rv_KO_MarP | 0.086 | 1.017 |
| hypoxia_3wks | -0.247 | 0.0 |
| hypoxia_6wks | 0.376 | 0.159 |
| glycerol | 0.145 | -0.607 |
| cholesterol | -0.027 | -0.517 |
| AJ | 0.297 | -0.306 |
| Bibs02 | -0.401 | 0.0 |
| Bibs02c | -0.014 | 0.37 |
| BL6 | -0.686 | -0.165 |
| BL6a | -0.709 | -0.746 |
| BXD01 | -0.066 | -1.817 |
| BXD010 | -1.218 | -2.265 |
| BXD011 | -0.753 | -1.65 |
| BXD03 | -1.092 | -2.731 |
| BXD04 | -0.919 | -2.014 |
| BXD05 | -0.984 | -2.026 |
| BXD06 | -0.388 | -1.608 |
| BXD07 | -0.689 | -2.084 |
| BXD08 | -0.175 | -1.438 |
| BXD09 | -1.253 | -2.288 |
| CAST | 0.44 | -0.063 |
| CCcont | -0.899 | -1.559 |
| DS01 | 0.513 | -0.424 |
| DS02 | -0.096 | 0.145 |
| DS04 | 2.204 | 0.516 |
| DS0c | 0.699 | -1.089 |
| GP01 | 1.139 | -0.432 |
| GP02 | 0.159 | -1.039 |
| GP0c | -0.189 | 0.82 |
| NOD | -0.129 | 0.931 |
| NZO | 0.351 | -0.084 |
| PWK | -0.05 | 0.5 |
| H37Rv_KO_CtpC | 0.199 | -0.045 |
| H37Rv_KO_CtpD | 0.696 | -0.053 |
| H37Rv_KO_Rv1272 | -1.431 | -0.805 |
| H37Rv_KO_SugABC | 0.426 | 1.365 |
| H37Rv_KO_MbtN | -0.523 | -1.748 |
| Trans05 | -0.296 | -0.492 |
| macrophage_unactivated | -0.439 | 1.222 |
| IL1 | -0.172 | -0.341 |
| Rapamycin | -0.301 | -0.353 |
| Tcell | 0.062 | 1.782 |
| GMCSF | -0.259 | -0.304 |
| IFNab | -1.255 | -0.729 |
| IFNg | -0.847 | 0.286 |
| IFNg_GMCSF1 | 0.817 | 2.385 |
| Rv1432_day32 | -0.18 | 0.18 |
| Rv1565c_day32 | 1.417 | 0.218 |
| secA2_input | -0.081 | 0.238 |
| delta_Rv3594 | -0.563 | -1.312 |
| delta_Rv3717 | -0.424 | -1.457 |
| delta_Rv3811 | -1.753 | -0.852 |
| delta_Rv0954 | 1.096 | 0.69 |
| PonA1 | -0.321 | -0.089 |
| EccD1_KO | 0.049 | 0.293 |
| EspI_KO | -0.043 | 0.171 |
| PE35_KO | 0.169 | -0.68 |
| PPE68_KO | 0.739 | -0.099 |
| glycerol2 | 0.391 | 0.331 |
| lignocerate | -0.14 | -0.343 |
| oleate | 0.604 | -0.4 |
| phosphatidylcholine | 0.161 | 0.088 |
| acetate | -0.944 | -0.535 |
| glucAc | -0.668 | 0.216 |
| Rv0950ko | -0.133 | 0.684 |
| Rv1096ko | 0.193 | -0.332 |
| Rv3684ko | -1.117 | 1.798 |
| delta_otsA_trehalose | 0.722 | 0.382 |