Top 10 genes with highest correlation to Rv0961/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0849/- | (cc=0.562) | info on Rv0849/- |
| Rv0611c/- | (cc=0.5296) | info on Rv0611c/- |
| Rv2322c/rocD1 | (cc=0.4872) | info on Rv2322c/rocD1 |
| Rv1945/- | (cc=0.4853) | info on Rv1945/- |
| Rv0754/PE_PGRS11 | (cc=0.472) | info on Rv0754/PE_PGRS11 |
| Rv2489c/- | (cc=0.471) | info on Rv2489c/- |
| Rv3638/- | (cc=0.4608) | info on Rv3638/- |
| Rv0953c/- | (cc=0.4566) | info on Rv0953c/- |
| Rv1834/lipZ | (cc=0.4445) | info on Rv1834/lipZ |
| Rv1148c/- | (cc=0.4393) | info on Rv1148c/- |
Correlation of Rv0961/- with Rv1945/-
Normalized LFCs for Rv0961/-:
(description and provenance of datasets)
| Rv0961/- | Rv1945/- | |
| Fe_supp_jason_reseq | -1.44 | -0.095 |
| low_pH_jason_reseq | -1.327 | 0.059 |
| NO_jason_reseq | 0.252 | 0.06 |
| B6_jason_reseq | 0.284 | -0.269 |
| MHCII_jason_reseq | -0.008 | -0.023 |
| Isoniazid02 | -0.93 | -2.426 |
| Rifampicin4 | -1.248 | 0.168 |
| Ethambutol3 | -0.693 | -2.053 |
| Meropenem3 | -1.041 | -1.997 |
| Vancomycin16 | -0.517 | -1.151 |
| Rv2680_day32 | 2.182 | 0.181 |
| H37Rv_KO_MarP | 0.086 | -0.109 |
| hypoxia_3wks | -0.247 | 0.104 |
| hypoxia_6wks | 0.376 | 0.027 |
| glycerol | 0.145 | -0.336 |
| cholesterol | -0.027 | 0.012 |
| AJ | 0.297 | 0.612 |
| Bibs02 | -0.401 | 0.073 |
| Bibs02c | -0.014 | 0.717 |
| BL6 | -0.686 | -0.456 |
| BL6a | -0.709 | 0.446 |
| BXD01 | -0.066 | -0.536 |
| BXD010 | -1.218 | -0.674 |
| BXD011 | -0.753 | -0.571 |
| BXD03 | -1.092 | -0.374 |
| BXD04 | -0.919 | -0.524 |
| BXD05 | -0.984 | 0.064 |
| BXD06 | -0.388 | -0.397 |
| BXD07 | -0.689 | -0.489 |
| BXD08 | -0.175 | -0.089 |
| BXD09 | -1.253 | -0.156 |
| CAST | 0.44 | 0.592 |
| CCcont | -0.899 | -0.888 |
| DS01 | 0.513 | 0.578 |
| DS02 | -0.096 | 0.95 |
| DS04 | 2.204 | 1.382 |
| DS0c | 0.699 | 1.105 |
| GP01 | 1.139 | 0.592 |
| GP02 | 0.159 | 0.171 |
| GP0c | -0.189 | -0.567 |
| NOD | -0.129 | -0.229 |
| NZO | 0.351 | 0.707 |
| PWK | -0.05 | 0.31 |
| H37Rv_KO_CtpC | 0.199 | 0.065 |
| H37Rv_KO_CtpD | 0.696 | 1.035 |
| H37Rv_KO_Rv1272 | -1.431 | 0.045 |
| H37Rv_KO_SugABC | 0.426 | -0.233 |
| H37Rv_KO_MbtN | -0.523 | 0.388 |
| Trans05 | -0.296 | 0.463 |
| macrophage_unactivated | -0.439 | -0.849 |
| IL1 | -0.172 | 0.35 |
| Rapamycin | -0.301 | -0.77 |
| Tcell | 0.062 | -0.587 |
| GMCSF | -0.259 | -0.71 |
| IFNab | -1.255 | -0.813 |
| IFNg | -0.847 | -0.342 |
| IFNg_GMCSF1 | 0.817 | -0.047 |
| Rv1432_day32 | -0.18 | -0.286 |
| Rv1565c_day32 | 1.417 | 6.0 |
| secA2_input | -0.081 | -0.338 |
| delta_Rv3594 | -0.563 | -0.05 |
| delta_Rv3717 | -0.424 | 0.573 |
| delta_Rv3811 | -1.753 | 0.207 |
| delta_Rv0954 | 1.096 | 0.572 |
| PonA1 | -0.321 | 0.276 |
| EccD1_KO | 0.049 | -0.368 |
| EspI_KO | -0.043 | 1.141 |
| PE35_KO | 0.169 | 0.303 |
| PPE68_KO | 0.739 | 1.011 |
| glycerol2 | 0.391 | -0.247 |
| lignocerate | -0.14 | -0.387 |
| oleate | 0.604 | 0.333 |
| phosphatidylcholine | 0.161 | 0.122 |
| acetate | -0.944 | -0.101 |
| glucAc | -0.668 | -0.701 |
| Rv0950ko | -0.133 | -0.317 |
| Rv1096ko | 0.193 | -0.178 |
| Rv3684ko | -1.117 | 0.495 |
| delta_otsA_trehalose | 0.722 | 0.26 |