Top 10 genes with highest correlation to Rv0953c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3445c/esxU | (cc=0.5483) | info on Rv3445c/esxU |
| Rv1834/lipZ | (cc=0.5478) | info on Rv1834/lipZ |
| Rv2636/- | (cc=0.5457) | info on Rv2636/- |
| Rv0233/nrdB | (cc=0.5378) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5305) | info on Rv1736c/narX |
| Rv3069/- | (cc=0.5241) | info on Rv3069/- |
| Rv0914c/- | (cc=0.511) | info on Rv0914c/- |
| Rv1940/ribA1 | (cc=0.5096) | info on Rv1940/ribA1 |
| Rv2322c/rocD1 | (cc=0.4938) | info on Rv2322c/rocD1 |
| Rv1774/- | (cc=0.4904) | info on Rv1774/- |
Correlation of Rv0953c/- with Rv2322c/rocD1
Normalized LFCs for Rv0953c/-:
(description and provenance of datasets)
| Rv0953c/- | Rv2322c/rocD1 | |
| Fe_supp_jason_reseq | -0.702 | -0.286 |
| low_pH_jason_reseq | 0.32 | -1.819 |
| NO_jason_reseq | -0.176 | 0.52 |
| B6_jason_reseq | -0.244 | 1.266 |
| MHCII_jason_reseq | -0.04 | 1.341 |
| Isoniazid02 | -0.809 | -0.866 |
| Rifampicin4 | -0.054 | -1.305 |
| Ethambutol3 | -1.358 | -1.036 |
| Meropenem3 | -0.32 | -1.68 |
| Vancomycin16 | -1.178 | -1.0 |
| Rv2680_day32 | -0.285 | 0.517 |
| H37Rv_KO_MarP | -0.556 | 1.017 |
| hypoxia_3wks | -0.251 | 0.0 |
| hypoxia_6wks | 0.223 | 0.159 |
| glycerol | -0.758 | -0.607 |
| cholesterol | -0.766 | -0.517 |
| AJ | 0.113 | -0.306 |
| Bibs02 | 0.388 | 0.0 |
| Bibs02c | 0.576 | 0.37 |
| BL6 | -1.769 | -0.165 |
| BL6a | -0.593 | -0.746 |
| BXD01 | -1.413 | -1.817 |
| BXD010 | -0.947 | -2.265 |
| BXD011 | -0.891 | -1.65 |
| BXD03 | -2.05 | -2.731 |
| BXD04 | -1.529 | -2.014 |
| BXD05 | -0.995 | -2.026 |
| BXD06 | -1.288 | -1.608 |
| BXD07 | -1.268 | -2.084 |
| BXD08 | -0.577 | -1.438 |
| BXD09 | -1.525 | -2.288 |
| CAST | -0.497 | -0.063 |
| CCcont | -1.367 | -1.559 |
| DS01 | 0.193 | -0.424 |
| DS02 | 0.137 | 0.145 |
| DS04 | 0.086 | 0.516 |
| DS0c | 0.797 | -1.089 |
| GP01 | -0.077 | -0.432 |
| GP02 | 1.002 | -1.039 |
| GP0c | -0.067 | 0.82 |
| NOD | 0.034 | 0.931 |
| NZO | -0.155 | -0.084 |
| PWK | 0.196 | 0.5 |
| H37Rv_KO_CtpC | -0.705 | -0.045 |
| H37Rv_KO_CtpD | -1.393 | -0.053 |
| H37Rv_KO_Rv1272 | -1.472 | -0.805 |
| H37Rv_KO_SugABC | -0.994 | 1.365 |
| H37Rv_KO_MbtN | -0.896 | -1.748 |
| Trans05 | 0.177 | -0.492 |
| macrophage_unactivated | -0.136 | 1.222 |
| IL1 | -0.442 | -0.341 |
| Rapamycin | -0.755 | -0.353 |
| Tcell | 0.355 | 1.782 |
| GMCSF | -0.351 | -0.304 |
| IFNab | -1.058 | -0.729 |
| IFNg | -0.441 | 0.286 |
| IFNg_GMCSF1 | -0.518 | 2.385 |
| Rv1432_day32 | -0.287 | 0.18 |
| Rv1565c_day32 | 0.725 | 0.218 |
| secA2_input | 0.43 | 0.238 |
| delta_Rv3594 | -0.883 | -1.312 |
| delta_Rv3717 | -1.0 | -1.457 |
| delta_Rv3811 | -0.934 | -0.852 |
| delta_Rv0954 | 0.689 | 0.69 |
| PonA1 | 0.177 | -0.089 |
| EccD1_KO | -0.036 | 0.293 |
| EspI_KO | -0.596 | 0.171 |
| PE35_KO | 0.502 | -0.68 |
| PPE68_KO | 0.0 | -0.099 |
| glycerol2 | -0.09 | 0.331 |
| lignocerate | 0.123 | -0.343 |
| oleate | -0.269 | -0.4 |
| phosphatidylcholine | -0.136 | 0.088 |
| acetate | -0.356 | -0.535 |
| glucAc | -0.113 | 0.216 |
| Rv0950ko | 0.501 | 0.684 |
| Rv1096ko | -0.359 | -0.332 |
| Rv3684ko | -0.069 | 1.798 |
| delta_otsA_trehalose | -0.223 | 0.382 |