Top 10 genes with highest correlation to Rv0953c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3445c/esxU | (cc=0.5483) | info on Rv3445c/esxU |
| Rv1834/lipZ | (cc=0.5478) | info on Rv1834/lipZ |
| Rv2636/- | (cc=0.5457) | info on Rv2636/- |
| Rv0233/nrdB | (cc=0.5378) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5305) | info on Rv1736c/narX |
| Rv3069/- | (cc=0.5241) | info on Rv3069/- |
| Rv0914c/- | (cc=0.511) | info on Rv0914c/- |
| Rv1940/ribA1 | (cc=0.5096) | info on Rv1940/ribA1 |
| Rv2322c/rocD1 | (cc=0.4938) | info on Rv2322c/rocD1 |
| Rv1774/- | (cc=0.4904) | info on Rv1774/- |
Correlation of Rv0953c/- with Rv1834/lipZ
Normalized LFCs for Rv0953c/-:
(description and provenance of datasets)
| Rv0953c/- | Rv1834/lipZ | |
| Fe_supp_jason_reseq | -0.702 | -1.206 |
| low_pH_jason_reseq | 0.32 | -1.429 |
| NO_jason_reseq | -0.176 | -0.118 |
| B6_jason_reseq | -0.244 | -0.153 |
| MHCII_jason_reseq | -0.04 | 0.675 |
| Isoniazid02 | -0.809 | 0.067 |
| Rifampicin4 | -0.054 | -0.753 |
| Ethambutol3 | -1.358 | -0.409 |
| Meropenem3 | -0.32 | 0.544 |
| Vancomycin16 | -1.178 | -0.589 |
| Rv2680_day32 | -0.285 | 0.179 |
| H37Rv_KO_MarP | -0.556 | -0.199 |
| hypoxia_3wks | -0.251 | -0.494 |
| hypoxia_6wks | 0.223 | 0.693 |
| glycerol | -0.758 | 1.011 |
| cholesterol | -0.766 | -0.287 |
| AJ | 0.113 | 0.183 |
| Bibs02 | 0.388 | 0.154 |
| Bibs02c | 0.576 | 1.15 |
| BL6 | -1.769 | -1.02 |
| BL6a | -0.593 | -0.023 |
| BXD01 | -1.413 | -1.259 |
| BXD010 | -0.947 | -2.69 |
| BXD011 | -0.891 | -1.546 |
| BXD03 | -2.05 | -2.962 |
| BXD04 | -1.529 | -2.493 |
| BXD05 | -0.995 | -1.942 |
| BXD06 | -1.288 | -1.572 |
| BXD07 | -1.268 | -1.875 |
| BXD08 | -0.577 | -1.191 |
| BXD09 | -1.525 | -2.028 |
| CAST | -0.497 | 0.766 |
| CCcont | -1.367 | -1.2 |
| DS01 | 0.193 | 0.147 |
| DS02 | 0.137 | -0.199 |
| DS04 | 0.086 | 0.132 |
| DS0c | 0.797 | -0.143 |
| GP01 | -0.077 | -0.122 |
| GP02 | 1.002 | -0.415 |
| GP0c | -0.067 | -0.737 |
| NOD | 0.034 | 0.353 |
| NZO | -0.155 | 0.069 |
| PWK | 0.196 | 0.318 |
| H37Rv_KO_CtpC | -0.705 | -0.245 |
| H37Rv_KO_CtpD | -1.393 | -0.316 |
| H37Rv_KO_Rv1272 | -1.472 | -0.745 |
| H37Rv_KO_SugABC | -0.994 | -0.204 |
| H37Rv_KO_MbtN | -0.896 | 0.75 |
| Trans05 | 0.177 | -0.469 |
| macrophage_unactivated | -0.136 | -1.569 |
| IL1 | -0.442 | -0.059 |
| Rapamycin | -0.755 | -1.525 |
| Tcell | 0.355 | -1.098 |
| GMCSF | -0.351 | 0.85 |
| IFNab | -1.058 | -1.953 |
| IFNg | -0.441 | -1.328 |
| IFNg_GMCSF1 | -0.518 | -0.679 |
| Rv1432_day32 | -0.287 | 0.674 |
| Rv1565c_day32 | 0.725 | 0.971 |
| secA2_input | 0.43 | 0.218 |
| delta_Rv3594 | -0.883 | -0.541 |
| delta_Rv3717 | -1.0 | -0.18 |
| delta_Rv3811 | -0.934 | -0.039 |
| delta_Rv0954 | 0.689 | -0.012 |
| PonA1 | 0.177 | -0.039 |
| EccD1_KO | -0.036 | 0.881 |
| EspI_KO | -0.596 | 0.607 |
| PE35_KO | 0.502 | 0.125 |
| PPE68_KO | 0.0 | -0.141 |
| glycerol2 | -0.09 | 0.893 |
| lignocerate | 0.123 | 0.955 |
| oleate | -0.269 | -0.157 |
| phosphatidylcholine | -0.136 | 0.609 |
| acetate | -0.356 | 1.199 |
| glucAc | -0.113 | 1.101 |
| Rv0950ko | 0.501 | 0.401 |
| Rv1096ko | -0.359 | 0.67 |
| Rv3684ko | -0.069 | 0.282 |
| delta_otsA_trehalose | -0.223 | 0.908 |