Top 10 genes with highest correlation to Rv0953c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3445c/esxU | (cc=0.5483) | info on Rv3445c/esxU |
| Rv1834/lipZ | (cc=0.5478) | info on Rv1834/lipZ |
| Rv2636/- | (cc=0.5457) | info on Rv2636/- |
| Rv0233/nrdB | (cc=0.5378) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5305) | info on Rv1736c/narX |
| Rv3069/- | (cc=0.5241) | info on Rv3069/- |
| Rv0914c/- | (cc=0.511) | info on Rv0914c/- |
| Rv1940/ribA1 | (cc=0.5096) | info on Rv1940/ribA1 |
| Rv2322c/rocD1 | (cc=0.4938) | info on Rv2322c/rocD1 |
| Rv1774/- | (cc=0.4904) | info on Rv1774/- |
Correlation of Rv0953c/- with Rv1940/ribA1
Normalized LFCs for Rv0953c/-:
(description and provenance of datasets)
| Rv0953c/- | Rv1940/ribA1 | |
| Fe_supp_jason_reseq | -0.702 | -0.242 |
| low_pH_jason_reseq | 0.32 | -0.478 |
| NO_jason_reseq | -0.176 | 0.693 |
| B6_jason_reseq | -0.244 | 0.547 |
| MHCII_jason_reseq | -0.04 | 0.377 |
| Isoniazid02 | -0.809 | 0.34 |
| Rifampicin4 | -0.054 | -0.076 |
| Ethambutol3 | -1.358 | -0.173 |
| Meropenem3 | -0.32 | 0.137 |
| Vancomycin16 | -1.178 | -0.294 |
| Rv2680_day32 | -0.285 | 0.15 |
| H37Rv_KO_MarP | -0.556 | -0.395 |
| hypoxia_3wks | -0.251 | 0.319 |
| hypoxia_6wks | 0.223 | -0.054 |
| glycerol | -0.758 | -0.151 |
| cholesterol | -0.766 | 0.955 |
| AJ | 0.113 | 0.526 |
| Bibs02 | 0.388 | 0.97 |
| Bibs02c | 0.576 | -0.729 |
| BL6 | -1.769 | -1.835 |
| BL6a | -0.593 | -1.185 |
| BXD01 | -1.413 | -0.377 |
| BXD010 | -0.947 | -2.104 |
| BXD011 | -0.891 | -1.335 |
| BXD03 | -2.05 | -1.162 |
| BXD04 | -1.529 | -1.644 |
| BXD05 | -0.995 | -1.493 |
| BXD06 | -1.288 | -1.094 |
| BXD07 | -1.268 | -1.309 |
| BXD08 | -0.577 | -0.287 |
| BXD09 | -1.525 | -0.954 |
| CAST | -0.497 | 0.058 |
| CCcont | -1.367 | -2.403 |
| DS01 | 0.193 | -0.009 |
| DS02 | 0.137 | 0.145 |
| DS04 | 0.086 | 0.87 |
| DS0c | 0.797 | 0.793 |
| GP01 | -0.077 | -0.597 |
| GP02 | 1.002 | 1.119 |
| GP0c | -0.067 | -0.651 |
| NOD | 0.034 | 0.47 |
| NZO | -0.155 | 0.0 |
| PWK | 0.196 | -0.155 |
| H37Rv_KO_CtpC | -0.705 | -0.047 |
| H37Rv_KO_CtpD | -1.393 | -1.751 |
| H37Rv_KO_Rv1272 | -1.472 | -1.875 |
| H37Rv_KO_SugABC | -0.994 | -1.902 |
| H37Rv_KO_MbtN | -0.896 | -0.912 |
| Trans05 | 0.177 | 0.549 |
| macrophage_unactivated | -0.136 | -0.237 |
| IL1 | -0.442 | 0.279 |
| Rapamycin | -0.755 | 0.687 |
| Tcell | 0.355 | -0.414 |
| GMCSF | -0.351 | 1.555 |
| IFNab | -1.058 | 0.771 |
| IFNg | -0.441 | -0.064 |
| IFNg_GMCSF1 | -0.518 | 0.801 |
| Rv1432_day32 | -0.287 | -0.709 |
| Rv1565c_day32 | 0.725 | 0.014 |
| secA2_input | 0.43 | -0.102 |
| delta_Rv3594 | -0.883 | 0.223 |
| delta_Rv3717 | -1.0 | 0.433 |
| delta_Rv3811 | -0.934 | 0.314 |
| delta_Rv0954 | 0.689 | -0.141 |
| PonA1 | 0.177 | 0.731 |
| EccD1_KO | -0.036 | -0.477 |
| EspI_KO | -0.596 | -0.585 |
| PE35_KO | 0.502 | -0.079 |
| PPE68_KO | 0.0 | 0.186 |
| glycerol2 | -0.09 | 0.294 |
| lignocerate | 0.123 | -0.245 |
| oleate | -0.269 | 0.98 |
| phosphatidylcholine | -0.136 | 0.773 |
| acetate | -0.356 | -0.213 |
| glucAc | -0.113 | -1.081 |
| Rv0950ko | 0.501 | -0.736 |
| Rv1096ko | -0.359 | 0.63 |
| Rv3684ko | -0.069 | -0.498 |
| delta_otsA_trehalose | -0.223 | 0.345 |