Top 10 genes with highest correlation to Rv0953c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3445c/esxU | (cc=0.5483) | info on Rv3445c/esxU |
| Rv1834/lipZ | (cc=0.5478) | info on Rv1834/lipZ |
| Rv2636/- | (cc=0.5457) | info on Rv2636/- |
| Rv0233/nrdB | (cc=0.5378) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5305) | info on Rv1736c/narX |
| Rv3069/- | (cc=0.5241) | info on Rv3069/- |
| Rv0914c/- | (cc=0.511) | info on Rv0914c/- |
| Rv1940/ribA1 | (cc=0.5096) | info on Rv1940/ribA1 |
| Rv2322c/rocD1 | (cc=0.4938) | info on Rv2322c/rocD1 |
| Rv1774/- | (cc=0.4904) | info on Rv1774/- |
Correlation of Rv0953c/- with Rv0233/nrdB
Normalized LFCs for Rv0953c/-:
(description and provenance of datasets)
| Rv0953c/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | -0.702 | 0.2 |
| low_pH_jason_reseq | 0.32 | -0.095 |
| NO_jason_reseq | -0.176 | -0.131 |
| B6_jason_reseq | -0.244 | 0.854 |
| MHCII_jason_reseq | -0.04 | 1.421 |
| Isoniazid02 | -0.809 | 0.322 |
| Rifampicin4 | -0.054 | -0.192 |
| Ethambutol3 | -1.358 | 0.154 |
| Meropenem3 | -0.32 | 0.291 |
| Vancomycin16 | -1.178 | -0.443 |
| Rv2680_day32 | -0.285 | 0.614 |
| H37Rv_KO_MarP | -0.556 | 0.167 |
| hypoxia_3wks | -0.251 | -0.159 |
| hypoxia_6wks | 0.223 | 0.192 |
| glycerol | -0.758 | -0.973 |
| cholesterol | -0.766 | -0.39 |
| AJ | 0.113 | 0.316 |
| Bibs02 | 0.388 | 0.891 |
| Bibs02c | 0.576 | 0.543 |
| BL6 | -1.769 | -1.416 |
| BL6a | -0.593 | -0.575 |
| BXD01 | -1.413 | -0.696 |
| BXD010 | -0.947 | -0.537 |
| BXD011 | -0.891 | -0.693 |
| BXD03 | -2.05 | -1.509 |
| BXD04 | -1.529 | -0.539 |
| BXD05 | -0.995 | -0.41 |
| BXD06 | -1.288 | -0.887 |
| BXD07 | -1.268 | -1.157 |
| BXD08 | -0.577 | -0.354 |
| BXD09 | -1.525 | -0.919 |
| CAST | -0.497 | -0.038 |
| CCcont | -1.367 | -1.564 |
| DS01 | 0.193 | 1.025 |
| DS02 | 0.137 | 0.748 |
| DS04 | 0.086 | 0.933 |
| DS0c | 0.797 | 0.548 |
| GP01 | -0.077 | -0.911 |
| GP02 | 1.002 | -0.359 |
| GP0c | -0.067 | -0.382 |
| NOD | 0.034 | 0.605 |
| NZO | -0.155 | 0.12 |
| PWK | 0.196 | -0.242 |
| H37Rv_KO_CtpC | -0.705 | -1.19 |
| H37Rv_KO_CtpD | -1.393 | -0.803 |
| H37Rv_KO_Rv1272 | -1.472 | -0.626 |
| H37Rv_KO_SugABC | -0.994 | -0.316 |
| H37Rv_KO_MbtN | -0.896 | -0.755 |
| Trans05 | 0.177 | -0.13 |
| macrophage_unactivated | -0.136 | -1.083 |
| IL1 | -0.442 | -0.193 |
| Rapamycin | -0.755 | -0.786 |
| Tcell | 0.355 | -0.046 |
| GMCSF | -0.351 | 0.459 |
| IFNab | -1.058 | -0.478 |
| IFNg | -0.441 | 0.38 |
| IFNg_GMCSF1 | -0.518 | -0.396 |
| Rv1432_day32 | -0.287 | 0.042 |
| Rv1565c_day32 | 0.725 | 0.963 |
| secA2_input | 0.43 | 0.106 |
| delta_Rv3594 | -0.883 | -0.399 |
| delta_Rv3717 | -1.0 | -0.766 |
| delta_Rv3811 | -0.934 | -0.589 |
| delta_Rv0954 | 0.689 | -0.252 |
| PonA1 | 0.177 | -0.066 |
| EccD1_KO | -0.036 | -0.286 |
| EspI_KO | -0.596 | -0.368 |
| PE35_KO | 0.502 | -1.041 |
| PPE68_KO | 0.0 | -0.483 |
| glycerol2 | -0.09 | -0.911 |
| lignocerate | 0.123 | -0.609 |
| oleate | -0.269 | -0.404 |
| phosphatidylcholine | -0.136 | -0.598 |
| acetate | -0.356 | -1.107 |
| glucAc | -0.113 | -1.029 |
| Rv0950ko | 0.501 | 0.308 |
| Rv1096ko | -0.359 | 0.805 |
| Rv3684ko | -0.069 | 0.259 |
| delta_otsA_trehalose | -0.223 | 0.437 |