Top 10 genes with highest correlation to Rv0953c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3445c/esxU | (cc=0.5483) | info on Rv3445c/esxU |
| Rv1834/lipZ | (cc=0.5478) | info on Rv1834/lipZ |
| Rv2636/- | (cc=0.5457) | info on Rv2636/- |
| Rv0233/nrdB | (cc=0.5378) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5305) | info on Rv1736c/narX |
| Rv3069/- | (cc=0.5241) | info on Rv3069/- |
| Rv0914c/- | (cc=0.511) | info on Rv0914c/- |
| Rv1940/ribA1 | (cc=0.5096) | info on Rv1940/ribA1 |
| Rv2322c/rocD1 | (cc=0.4938) | info on Rv2322c/rocD1 |
| Rv1774/- | (cc=0.4904) | info on Rv1774/- |
Correlation of Rv0953c/- with Rv3445c/esxU
Normalized LFCs for Rv0953c/-:
(description and provenance of datasets)
| Rv0953c/- | Rv3445c/esxU | |
| Fe_supp_jason_reseq | -0.702 | -0.854 |
| low_pH_jason_reseq | 0.32 | -0.778 |
| NO_jason_reseq | -0.176 | 0.011 |
| B6_jason_reseq | -0.244 | 1.196 |
| MHCII_jason_reseq | -0.04 | 1.337 |
| Isoniazid02 | -0.809 | 0.106 |
| Rifampicin4 | -0.054 | -0.208 |
| Ethambutol3 | -1.358 | 0.054 |
| Meropenem3 | -0.32 | 1.584 |
| Vancomycin16 | -1.178 | -0.061 |
| Rv2680_day32 | -0.285 | -0.72 |
| H37Rv_KO_MarP | -0.556 | -0.801 |
| hypoxia_3wks | -0.251 | -0.379 |
| hypoxia_6wks | 0.223 | -0.205 |
| glycerol | -0.758 | -1.697 |
| cholesterol | -0.766 | -0.468 |
| AJ | 0.113 | -0.069 |
| Bibs02 | 0.388 | 0.633 |
| Bibs02c | 0.576 | 0.33 |
| BL6 | -1.769 | -1.139 |
| BL6a | -0.593 | -0.598 |
| BXD01 | -1.413 | -0.715 |
| BXD010 | -0.947 | -1.243 |
| BXD011 | -0.891 | -0.593 |
| BXD03 | -2.05 | -0.593 |
| BXD04 | -1.529 | -0.114 |
| BXD05 | -0.995 | -1.909 |
| BXD06 | -1.288 | -1.022 |
| BXD07 | -1.268 | -1.357 |
| BXD08 | -0.577 | -0.366 |
| BXD09 | -1.525 | -1.355 |
| CAST | -0.497 | -0.158 |
| CCcont | -1.367 | -1.298 |
| DS01 | 0.193 | 0.956 |
| DS02 | 0.137 | 1.1 |
| DS04 | 0.086 | 0.305 |
| DS0c | 0.797 | 0.544 |
| GP01 | -0.077 | 0.275 |
| GP02 | 1.002 | 0.421 |
| GP0c | -0.067 | 0.528 |
| NOD | 0.034 | -0.83 |
| NZO | -0.155 | -0.335 |
| PWK | 0.196 | -0.033 |
| H37Rv_KO_CtpC | -0.705 | -0.86 |
| H37Rv_KO_CtpD | -1.393 | -3.872 |
| H37Rv_KO_Rv1272 | -1.472 | -3.257 |
| H37Rv_KO_SugABC | -0.994 | -1.838 |
| H37Rv_KO_MbtN | -0.896 | -0.933 |
| Trans05 | 0.177 | -1.718 |
| macrophage_unactivated | -0.136 | 0.379 |
| IL1 | -0.442 | -0.214 |
| Rapamycin | -0.755 | -0.301 |
| Tcell | 0.355 | 0.254 |
| GMCSF | -0.351 | 0.528 |
| IFNab | -1.058 | -0.2 |
| IFNg | -0.441 | -1.053 |
| IFNg_GMCSF1 | -0.518 | 1.109 |
| Rv1432_day32 | -0.287 | 0.567 |
| Rv1565c_day32 | 0.725 | 0.232 |
| secA2_input | 0.43 | 2.519 |
| delta_Rv3594 | -0.883 | 0.0 |
| delta_Rv3717 | -1.0 | -0.189 |
| delta_Rv3811 | -0.934 | -0.335 |
| delta_Rv0954 | 0.689 | 0.758 |
| PonA1 | 0.177 | 0.427 |
| EccD1_KO | -0.036 | 0.47 |
| EspI_KO | -0.596 | 0.747 |
| PE35_KO | 0.502 | 1.158 |
| PPE68_KO | 0.0 | -0.022 |
| glycerol2 | -0.09 | 0.867 |
| lignocerate | 0.123 | 0.96 |
| oleate | -0.269 | 0.988 |
| phosphatidylcholine | -0.136 | 0.81 |
| acetate | -0.356 | 1.335 |
| glucAc | -0.113 | 0.023 |
| Rv0950ko | 0.501 | 1.375 |
| Rv1096ko | -0.359 | 2.576 |
| Rv3684ko | -0.069 | 1.772 |
| delta_otsA_trehalose | -0.223 | -1.792 |