Top 10 genes with highest correlation to Rv0928/pstS3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0930/pstA1 | (cc=0.9729) | info on Rv0930/pstA1 |
| Rv0820/phoT | (cc=0.9705) | info on Rv0820/phoT |
| Rv0929/pstC2 | (cc=0.9699) | info on Rv0929/pstC2 |
| Rv0818/- | (cc=0.8532) | info on Rv0818/- |
| Rv1925/fadD31 | (cc=0.7908) | info on Rv1925/fadD31 |
| Rv0924c/mntH | (cc=0.7725) | info on Rv0924c/mntH |
| Rv1058/fadD14 | (cc=0.7657) | info on Rv1058/fadD14 |
| Rv3050c/- | (cc=0.7657) | info on Rv3050c/- |
| Rv0642c/mmaA4 | (cc=0.7472) | info on Rv0642c/mmaA4 |
| Rv0989c/grcC2 | (cc=0.7351) | info on Rv0989c/grcC2 |
Correlation of Rv0928/pstS3 with Rv1925/fadD31
Normalized LFCs for Rv0928/pstS3:
(description and provenance of datasets)
| Rv0928/pstS3 | Rv1925/fadD31 | |
| Fe_supp_jason_reseq | -3.391 | 1.332 |
| low_pH_jason_reseq | 1.549 | 1.553 |
| NO_jason_reseq | -3.363 | 0.291 |
| B6_jason_reseq | 0.406 | 2.287 |
| MHCII_jason_reseq | 0.372 | 0.401 |
| Isoniazid02 | 0.156 | -0.943 |
| Rifampicin4 | -4.059 | -2.166 |
| Ethambutol3 | -0.989 | -0.22 |
| Meropenem3 | -2.653 | -0.709 |
| Vancomycin16 | -2.26 | -5.027 |
| Rv2680_day32 | 3.982 | 1.518 |
| H37Rv_KO_MarP | -2.74 | 0.454 |
| hypoxia_3wks | -3.413 | -3.246 |
| hypoxia_6wks | 1.128 | 1.942 |
| glycerol | 4.051 | 0.875 |
| cholesterol | 3.767 | 0.805 |
| AJ | 1.99 | 0.555 |
| Bibs02 | 1.819 | 0.619 |
| Bibs02c | 2.23 | 0.762 |
| BL6 | 5.545 | 2.426 |
| BL6a | 6.0 | 3.626 |
| BXD01 | 6.0 | 3.932 |
| BXD010 | 6.0 | 3.693 |
| BXD011 | 6.0 | 5.692 |
| BXD03 | 5.608 | 2.496 |
| BXD04 | 6.0 | 4.113 |
| BXD05 | 6.0 | 3.297 |
| BXD06 | 6.0 | 4.596 |
| BXD07 | 6.0 | 4.152 |
| BXD08 | 6.0 | 4.38 |
| BXD09 | 6.0 | 4.226 |
| CAST | 2.334 | 1.168 |
| CCcont | 3.228 | 0.689 |
| DS01 | 0.0 | 0.773 |
| DS02 | 0.101 | 0.803 |
| DS04 | 2.0 | 1.334 |
| DS0c | 1.053 | -0.016 |
| GP01 | 5.887 | 2.856 |
| GP02 | 5.592 | 3.646 |
| GP0c | 6.0 | 2.237 |
| NOD | 0.649 | -0.57 |
| NZO | 2.227 | 1.357 |
| PWK | 4.575 | 3.684 |
| H37Rv_KO_CtpC | 3.13 | 1.444 |
| H37Rv_KO_CtpD | 1.414 | -0.219 |
| H37Rv_KO_Rv1272 | 4.357 | 3.107 |
| H37Rv_KO_SugABC | 3.955 | 1.881 |
| H37Rv_KO_MbtN | 6.0 | 4.596 |
| Trans05 | 5.513 | 3.83 |
| macrophage_unactivated | -2.632 | -3.608 |
| IL1 | -3.073 | -0.217 |
| Rapamycin | -3.492 | -0.697 |
| Tcell | -2.47 | 0.375 |
| GMCSF | -3.11 | -3.601 |
| IFNab | 2.618 | 0.511 |
| IFNg | -5.161 | -0.569 |
| IFNg_GMCSF1 | -4.672 | -0.946 |
| Rv1432_day32 | 6.0 | 0.554 |
| Rv1565c_day32 | -0.314 | -3.911 |
| secA2_input | -1.969 | 0.009 |
| delta_Rv3594 | -0.055 | 0.422 |
| delta_Rv3717 | 2.024 | 2.923 |
| delta_Rv3811 | 0.581 | 1.325 |
| delta_Rv0954 | -3.635 | -1.804 |
| PonA1 | -3.624 | -2.193 |
| EccD1_KO | -2.447 | -2.273 |
| EspI_KO | -1.258 | -2.313 |
| PE35_KO | -0.557 | -2.654 |
| PPE68_KO | -1.51 | -2.4 |
| glycerol2 | -4.89 | 0.198 |
| lignocerate | -1.422 | -0.038 |
| oleate | -3.927 | -1.096 |
| phosphatidylcholine | -2.553 | 0.342 |
| acetate | -0.17 | -0.261 |
| glucAc | -0.089 | 0.266 |
| Rv0950ko | -3.986 | -1.248 |
| Rv1096ko | 1.674 | -1.553 |
| Rv3684ko | 0.082 | 0.527 |
| delta_otsA_trehalose | -0.532 | -0.149 |