Top 10 genes with highest correlation to Rv0904c/accD3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3455c/truA | (cc=0.5512) | info on Rv3455c/truA |
| Rv2581c/- | (cc=0.538) | info on Rv2581c/- |
| Rv3303c/lpdA | (cc=0.4981) | info on Rv3303c/lpdA |
| Rv2334/cysK1 | (cc=0.4927) | info on Rv2334/cysK1 |
| Rv1178/- | (cc=0.471) | info on Rv1178/- |
| Rv3719/- | (cc=0.4354) | info on Rv3719/- |
| Rv2427c/proA | (cc=0.4346) | info on Rv2427c/proA |
| Rv0908/ctpE | (cc=0.4327) | info on Rv0908/ctpE |
| Rv3068c/pgmA | (cc=0.4316) | info on Rv3068c/pgmA |
| Rv3276c/purK | (cc=0.4257) | info on Rv3276c/purK |
Correlation of Rv0904c/accD3 with Rv3068c/pgmA
Normalized LFCs for Rv0904c/accD3:
(description and provenance of datasets)
| Rv0904c/accD3 | Rv3068c/pgmA | |
| Fe_supp_jason_reseq | -0.521 | -0.557 |
| low_pH_jason_reseq | 0.236 | -1.005 |
| NO_jason_reseq | 0.827 | -0.927 |
| B6_jason_reseq | -0.215 | 0.188 |
| MHCII_jason_reseq | -0.323 | -0.345 |
| Isoniazid02 | 0.469 | -0.185 |
| Rifampicin4 | -2.036 | -0.236 |
| Ethambutol3 | -0.298 | 0.1 |
| Meropenem3 | -0.648 | 0.365 |
| Vancomycin16 | -0.796 | 0.127 |
| Rv2680_day32 | 0.0 | 0.223 |
| H37Rv_KO_MarP | 0.586 | 0.058 |
| hypoxia_3wks | -3.142 | -2.731 |
| hypoxia_6wks | -0.472 | -3.408 |
| glycerol | -0.565 | -0.14 |
| cholesterol | -0.647 | 3.524 |
| AJ | -0.489 | -0.21 |
| Bibs02 | -0.346 | -0.619 |
| Bibs02c | -0.512 | -0.483 |
| BL6 | -0.131 | 0.179 |
| BL6a | -0.375 | 0.056 |
| BXD01 | -0.619 | 0.261 |
| BXD010 | -0.2 | 0.242 |
| BXD011 | -0.624 | 0.659 |
| BXD03 | -0.85 | 0.39 |
| BXD04 | -0.288 | 0.157 |
| BXD05 | -0.141 | 0.455 |
| BXD06 | -0.154 | 0.289 |
| BXD07 | -0.454 | 0.188 |
| BXD08 | 0.07 | -0.127 |
| BXD09 | -0.444 | 0.072 |
| CAST | 0.385 | -0.27 |
| CCcont | -0.508 | -0.128 |
| DS01 | -0.156 | -0.152 |
| DS02 | -0.66 | 0.082 |
| DS04 | 0.669 | 0.495 |
| DS0c | -1.191 | -0.338 |
| GP01 | -0.018 | 1.364 |
| GP02 | 0.887 | 0.758 |
| GP0c | -0.714 | 0.159 |
| NOD | -0.376 | -0.898 |
| NZO | -0.558 | -0.244 |
| PWK | 0.267 | -0.057 |
| H37Rv_KO_CtpC | -0.06 | 0.069 |
| H37Rv_KO_CtpD | -0.416 | -0.262 |
| H37Rv_KO_Rv1272 | -1.198 | -0.142 |
| H37Rv_KO_SugABC | -0.277 | 0.48 |
| H37Rv_KO_MbtN | 0.132 | -0.62 |
| Trans05 | 0.509 | -0.416 |
| macrophage_unactivated | -1.442 | 0.202 |
| IL1 | 0.605 | -0.288 |
| Rapamycin | 0.0 | -0.347 |
| Tcell | -1.153 | -0.094 |
| GMCSF | 0.042 | 0.349 |
| IFNab | -1.448 | -0.088 |
| IFNg | -0.839 | -0.388 |
| IFNg_GMCSF1 | -1.238 | 0.069 |
| Rv1432_day32 | -0.429 | 0.576 |
| Rv1565c_day32 | -0.583 | -0.444 |
| secA2_input | 0.0 | 0.095 |
| delta_Rv3594 | -1.551 | -0.075 |
| delta_Rv3717 | -0.719 | -0.43 |
| delta_Rv3811 | -0.787 | -0.65 |
| delta_Rv0954 | -0.3 | -0.208 |
| PonA1 | 0.202 | 0.167 |
| EccD1_KO | 0.674 | 0.431 |
| EspI_KO | 1.052 | 0.374 |
| PE35_KO | 0.117 | -0.257 |
| PPE68_KO | 0.064 | -0.55 |
| glycerol2 | -0.975 | 0.269 |
| lignocerate | -2.457 | -2.53 |
| oleate | -2.861 | -2.101 |
| phosphatidylcholine | -1.753 | -3.003 |
| acetate | 0.226 | 0.229 |
| glucAc | -0.176 | -0.089 |
| Rv0950ko | 1.125 | 0.419 |
| Rv1096ko | 1.692 | 0.709 |
| Rv3684ko | 2.83 | 0.563 |
| delta_otsA_trehalose | 0.514 | 0.3 |