Top 10 genes with highest correlation to Rv0904c/accD3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3455c/truA | (cc=0.5512) | info on Rv3455c/truA |
| Rv2581c/- | (cc=0.538) | info on Rv2581c/- |
| Rv3303c/lpdA | (cc=0.4981) | info on Rv3303c/lpdA |
| Rv2334/cysK1 | (cc=0.4927) | info on Rv2334/cysK1 |
| Rv1178/- | (cc=0.471) | info on Rv1178/- |
| Rv3719/- | (cc=0.4354) | info on Rv3719/- |
| Rv2427c/proA | (cc=0.4346) | info on Rv2427c/proA |
| Rv0908/ctpE | (cc=0.4327) | info on Rv0908/ctpE |
| Rv3068c/pgmA | (cc=0.4316) | info on Rv3068c/pgmA |
| Rv3276c/purK | (cc=0.4257) | info on Rv3276c/purK |
Correlation of Rv0904c/accD3 with Rv2334/cysK1
Normalized LFCs for Rv0904c/accD3:
(description and provenance of datasets)
| Rv0904c/accD3 | Rv2334/cysK1 | |
| Fe_supp_jason_reseq | -0.521 | 2.437 |
| low_pH_jason_reseq | 0.236 | 5.069 |
| NO_jason_reseq | 0.827 | 1.089 |
| B6_jason_reseq | -0.215 | 0.357 |
| MHCII_jason_reseq | -0.323 | -0.257 |
| Isoniazid02 | 0.469 | 3.403 |
| Rifampicin4 | -2.036 | 0.634 |
| Ethambutol3 | -0.298 | 0.285 |
| Meropenem3 | -0.648 | -0.335 |
| Vancomycin16 | -0.796 | 0.809 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 0.586 | 1.666 |
| hypoxia_3wks | -3.142 | -1.284 |
| hypoxia_6wks | -0.472 | 0.378 |
| glycerol | -0.565 | 2.455 |
| cholesterol | -0.647 | 1.761 |
| AJ | -0.489 | 0.232 |
| Bibs02 | -0.346 | 0.0 |
| Bibs02c | -0.512 | 0.0 |
| BL6 | -0.131 | 0.53 |
| BL6a | -0.375 | 1.435 |
| BXD01 | -0.619 | 2.245 |
| BXD010 | -0.2 | 1.115 |
| BXD011 | -0.624 | 0.626 |
| BXD03 | -0.85 | 1.351 |
| BXD04 | -0.288 | 1.184 |
| BXD05 | -0.141 | 1.109 |
| BXD06 | -0.154 | 1.485 |
| BXD07 | -0.454 | 0.768 |
| BXD08 | 0.07 | 2.419 |
| BXD09 | -0.444 | 0.863 |
| CAST | 0.385 | 3.337 |
| CCcont | -0.508 | 1.492 |
| DS01 | -0.156 | 0.45 |
| DS02 | -0.66 | 0.217 |
| DS04 | 0.669 | 0.37 |
| DS0c | -1.191 | 0.0 |
| GP01 | -0.018 | 0.0 |
| GP02 | 0.887 | 0.0 |
| GP0c | -0.714 | 0.0 |
| NOD | -0.376 | 1.507 |
| NZO | -0.558 | 0.0 |
| PWK | 0.267 | 0.196 |
| H37Rv_KO_CtpC | -0.06 | 0.0 |
| H37Rv_KO_CtpD | -0.416 | 0.703 |
| H37Rv_KO_Rv1272 | -1.198 | 0.269 |
| H37Rv_KO_SugABC | -0.277 | 0.664 |
| H37Rv_KO_MbtN | 0.132 | 0.283 |
| Trans05 | 0.509 | 0.803 |
| macrophage_unactivated | -1.442 | 0.398 |
| IL1 | 0.605 | -0.409 |
| Rapamycin | 0.0 | -0.424 |
| Tcell | -1.153 | -0.45 |
| GMCSF | 0.042 | 0.0 |
| IFNab | -1.448 | -0.417 |
| IFNg | -0.839 | -0.369 |
| IFNg_GMCSF1 | -1.238 | 0.0 |
| Rv1432_day32 | -0.429 | -0.18 |
| Rv1565c_day32 | -0.583 | 1.507 |
| secA2_input | 0.0 | -1.315 |
| delta_Rv3594 | -1.551 | -2.522 |
| delta_Rv3717 | -0.719 | -2.896 |
| delta_Rv3811 | -0.787 | -2.767 |
| delta_Rv0954 | -0.3 | -0.716 |
| PonA1 | 0.202 | 0.864 |
| EccD1_KO | 0.674 | 0.526 |
| EspI_KO | 1.052 | 2.053 |
| PE35_KO | 0.117 | 0.683 |
| PPE68_KO | 0.064 | 1.59 |
| glycerol2 | -0.975 | -1.208 |
| lignocerate | -2.457 | -0.756 |
| oleate | -2.861 | -1.418 |
| phosphatidylcholine | -1.753 | -1.401 |
| acetate | 0.226 | 0.72 |
| glucAc | -0.176 | 0.272 |
| Rv0950ko | 1.125 | 1.999 |
| Rv1096ko | 1.692 | 2.925 |
| Rv3684ko | 2.83 | 2.044 |
| delta_otsA_trehalose | 0.514 | 0.854 |