Top 10 genes with highest correlation to Rv0904c/accD3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3455c/truA | (cc=0.5512) | info on Rv3455c/truA |
| Rv2581c/- | (cc=0.538) | info on Rv2581c/- |
| Rv3303c/lpdA | (cc=0.4981) | info on Rv3303c/lpdA |
| Rv2334/cysK1 | (cc=0.4927) | info on Rv2334/cysK1 |
| Rv1178/- | (cc=0.471) | info on Rv1178/- |
| Rv3719/- | (cc=0.4354) | info on Rv3719/- |
| Rv2427c/proA | (cc=0.4346) | info on Rv2427c/proA |
| Rv0908/ctpE | (cc=0.4327) | info on Rv0908/ctpE |
| Rv3068c/pgmA | (cc=0.4316) | info on Rv3068c/pgmA |
| Rv3276c/purK | (cc=0.4257) | info on Rv3276c/purK |
Correlation of Rv0904c/accD3 with Rv0908/ctpE
Normalized LFCs for Rv0904c/accD3:
(description and provenance of datasets)
| Rv0904c/accD3 | Rv0908/ctpE | |
| Fe_supp_jason_reseq | -0.521 | -0.084 |
| low_pH_jason_reseq | 0.236 | -0.587 |
| NO_jason_reseq | 0.827 | 0.034 |
| B6_jason_reseq | -0.215 | 0.361 |
| MHCII_jason_reseq | -0.323 | -1.273 |
| Isoniazid02 | 0.469 | 0.164 |
| Rifampicin4 | -2.036 | -0.179 |
| Ethambutol3 | -0.298 | -0.297 |
| Meropenem3 | -0.648 | 1.093 |
| Vancomycin16 | -0.796 | -0.029 |
| Rv2680_day32 | 0.0 | -0.174 |
| H37Rv_KO_MarP | 0.586 | 0.785 |
| hypoxia_3wks | -3.142 | -1.571 |
| hypoxia_6wks | -0.472 | -2.224 |
| glycerol | -0.565 | -0.803 |
| cholesterol | -0.647 | 0.095 |
| AJ | -0.489 | -0.2 |
| Bibs02 | -0.346 | -0.041 |
| Bibs02c | -0.512 | -0.064 |
| BL6 | -0.131 | 0.037 |
| BL6a | -0.375 | -0.522 |
| BXD01 | -0.619 | -0.654 |
| BXD010 | -0.2 | -0.326 |
| BXD011 | -0.624 | 0.179 |
| BXD03 | -0.85 | 0.19 |
| BXD04 | -0.288 | 1.114 |
| BXD05 | -0.141 | 0.198 |
| BXD06 | -0.154 | -0.083 |
| BXD07 | -0.454 | -0.392 |
| BXD08 | 0.07 | 0.222 |
| BXD09 | -0.444 | -0.528 |
| CAST | 0.385 | 0.369 |
| CCcont | -0.508 | -0.768 |
| DS01 | -0.156 | -0.128 |
| DS02 | -0.66 | 0.033 |
| DS04 | 0.669 | 0.044 |
| DS0c | -1.191 | -0.17 |
| GP01 | -0.018 | -0.583 |
| GP02 | 0.887 | -0.304 |
| GP0c | -0.714 | -0.517 |
| NOD | -0.376 | 1.451 |
| NZO | -0.558 | -0.47 |
| PWK | 0.267 | 0.183 |
| H37Rv_KO_CtpC | -0.06 | 0.477 |
| H37Rv_KO_CtpD | -0.416 | -0.748 |
| H37Rv_KO_Rv1272 | -1.198 | 0.923 |
| H37Rv_KO_SugABC | -0.277 | 0.484 |
| H37Rv_KO_MbtN | 0.132 | -0.007 |
| Trans05 | 0.509 | 0.497 |
| macrophage_unactivated | -1.442 | -0.603 |
| IL1 | 0.605 | 0.0 |
| Rapamycin | 0.0 | -0.368 |
| Tcell | -1.153 | -0.085 |
| GMCSF | 0.042 | 0.475 |
| IFNab | -1.448 | -0.71 |
| IFNg | -0.839 | -0.588 |
| IFNg_GMCSF1 | -1.238 | -0.553 |
| Rv1432_day32 | -0.429 | 0.055 |
| Rv1565c_day32 | -0.583 | 1.159 |
| secA2_input | 0.0 | -0.734 |
| delta_Rv3594 | -1.551 | -0.418 |
| delta_Rv3717 | -0.719 | -0.766 |
| delta_Rv3811 | -0.787 | -1.044 |
| delta_Rv0954 | -0.3 | 0.03 |
| PonA1 | 0.202 | 0.144 |
| EccD1_KO | 0.674 | 0.835 |
| EspI_KO | 1.052 | 0.684 |
| PE35_KO | 0.117 | 0.907 |
| PPE68_KO | 0.064 | 1.085 |
| glycerol2 | -0.975 | -0.099 |
| lignocerate | -2.457 | -0.313 |
| oleate | -2.861 | -0.588 |
| phosphatidylcholine | -1.753 | 0.076 |
| acetate | 0.226 | 0.0 |
| glucAc | -0.176 | -0.014 |
| Rv0950ko | 1.125 | 0.98 |
| Rv1096ko | 1.692 | 1.158 |
| Rv3684ko | 2.83 | 0.776 |
| delta_otsA_trehalose | 0.514 | -0.383 |