Top 10 genes with highest correlation to Rv0881/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3416/whiB3 | (cc=0.4793) | info on Rv3416/whiB3 |
| Rv2742c/- | (cc=0.4764) | info on Rv2742c/- |
| Rv2002/fabG3 | (cc=0.4705) | info on Rv2002/fabG3 |
| Rv3652/PE_PGRS60 | (cc=0.4674) | info on Rv3652/PE_PGRS60 |
| Rv3078/hab | (cc=0.4657) | info on Rv3078/hab |
| Rv2226/- | (cc=0.4566) | info on Rv2226/- |
| Rv1769/- | (cc=0.4547) | info on Rv1769/- |
| Rv0449c/- | (cc=0.4546) | info on Rv0449c/- |
| Rv0609/vapC28 | (cc=0.4463) | info on Rv0609/vapC28 |
| Rv0521/- | (cc=0.44) | info on Rv0521/- |
Correlation of Rv0881/- with Rv3652/PE_PGRS60
Normalized LFCs for Rv0881/-:
(description and provenance of datasets)
| Rv0881/- | Rv3652/PE_PGRS60 | |
| Fe_supp_jason_reseq | -1.579 | -0.27 |
| low_pH_jason_reseq | 0.738 | 1.079 |
| NO_jason_reseq | 0.11 | 0.186 |
| B6_jason_reseq | -0.982 | 0.641 |
| MHCII_jason_reseq | -0.522 | 0.67 |
| Isoniazid02 | -0.358 | 0.33 |
| Rifampicin4 | -0.447 | -0.217 |
| Ethambutol3 | 0.164 | 0.169 |
| Meropenem3 | 0.351 | 0.153 |
| Vancomycin16 | -0.037 | 1.101 |
| Rv2680_day32 | 2.658 | 2.801 |
| H37Rv_KO_MarP | 0.758 | 0.104 |
| hypoxia_3wks | -0.136 | 0.618 |
| hypoxia_6wks | -0.192 | 0.084 |
| glycerol | -0.042 | 0.62 |
| cholesterol | -0.77 | 0.779 |
| AJ | -0.032 | -0.111 |
| Bibs02 | -0.24 | 0.699 |
| Bibs02c | -0.477 | -0.573 |
| BL6 | -1.022 | -1.002 |
| BL6a | -0.555 | -0.512 |
| BXD01 | -0.768 | -0.249 |
| BXD010 | -1.419 | -0.837 |
| BXD011 | -0.663 | -0.305 |
| BXD03 | -0.952 | -1.399 |
| BXD04 | -0.775 | -0.409 |
| BXD05 | -1.204 | -0.534 |
| BXD06 | -0.435 | -0.522 |
| BXD07 | -1.09 | -0.716 |
| BXD08 | -0.195 | -0.091 |
| BXD09 | -0.61 | -0.683 |
| CAST | -0.374 | 0.155 |
| CCcont | -0.419 | -1.008 |
| DS01 | -0.327 | 0.712 |
| DS02 | -1.035 | -0.26 |
| DS04 | 0.878 | 0.557 |
| DS0c | -0.335 | -0.508 |
| GP01 | 0.59 | -0.386 |
| GP02 | -0.011 | 0.445 |
| GP0c | -0.538 | -0.907 |
| NOD | -0.796 | -0.462 |
| NZO | -0.027 | 0.262 |
| PWK | 0.129 | -0.618 |
| H37Rv_KO_CtpC | -1.402 | -2.385 |
| H37Rv_KO_CtpD | -0.659 | -1.86 |
| H37Rv_KO_Rv1272 | -0.059 | -0.668 |
| H37Rv_KO_SugABC | 0.109 | -1.701 |
| H37Rv_KO_MbtN | -0.858 | -0.861 |
| Trans05 | -0.77 | -1.511 |
| macrophage_unactivated | -0.404 | 0.114 |
| IL1 | -0.7 | 1.21 |
| Rapamycin | 0.043 | -0.377 |
| Tcell | -1.206 | -0.222 |
| GMCSF | 0.657 | 0.61 |
| IFNab | 0.357 | 1.233 |
| IFNg | -0.072 | -0.139 |
| IFNg_GMCSF1 | 0.6 | 0.138 |
| Rv1432_day32 | 0.635 | 0.343 |
| Rv1565c_day32 | -1.339 | 0.722 |
| secA2_input | 1.885 | -0.258 |
| delta_Rv3594 | 0.805 | -0.376 |
| delta_Rv3717 | 1.013 | 0.789 |
| delta_Rv3811 | 0.638 | -0.291 |
| delta_Rv0954 | -0.155 | 0.247 |
| PonA1 | 0.682 | -0.455 |
| EccD1_KO | 0.296 | 0.638 |
| EspI_KO | 0.402 | 0.428 |
| PE35_KO | 1.561 | 1.152 |
| PPE68_KO | 0.909 | 0.729 |
| glycerol2 | 0.43 | 0.42 |
| lignocerate | 0.414 | -0.161 |
| oleate | 0.235 | 0.961 |
| phosphatidylcholine | 0.232 | 0.193 |
| acetate | 0.085 | -0.091 |
| glucAc | 0.063 | -0.6 |
| Rv0950ko | -1.369 | -0.226 |
| Rv1096ko | -0.133 | 0.422 |
| Rv3684ko | -0.766 | 0.177 |
| delta_otsA_trehalose | -0.551 | 1.871 |