Top 10 genes with highest correlation to Rv0881/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3416/whiB3 | (cc=0.4793) | info on Rv3416/whiB3 |
| Rv2742c/- | (cc=0.4764) | info on Rv2742c/- |
| Rv2002/fabG3 | (cc=0.4705) | info on Rv2002/fabG3 |
| Rv3652/PE_PGRS60 | (cc=0.4674) | info on Rv3652/PE_PGRS60 |
| Rv3078/hab | (cc=0.4657) | info on Rv3078/hab |
| Rv2226/- | (cc=0.4566) | info on Rv2226/- |
| Rv1769/- | (cc=0.4547) | info on Rv1769/- |
| Rv0449c/- | (cc=0.4546) | info on Rv0449c/- |
| Rv0609/vapC28 | (cc=0.4463) | info on Rv0609/vapC28 |
| Rv0521/- | (cc=0.44) | info on Rv0521/- |
Correlation of Rv0881/- with Rv3078/hab
Normalized LFCs for Rv0881/-:
(description and provenance of datasets)
| Rv0881/- | Rv3078/hab | |
| Fe_supp_jason_reseq | -1.579 | -2.251 |
| low_pH_jason_reseq | 0.738 | -0.842 |
| NO_jason_reseq | 0.11 | 0.336 |
| B6_jason_reseq | -0.982 | 0.061 |
| MHCII_jason_reseq | -0.522 | 0.791 |
| Isoniazid02 | -0.358 | 0.236 |
| Rifampicin4 | -0.447 | 0.038 |
| Ethambutol3 | 0.164 | -0.387 |
| Meropenem3 | 0.351 | -0.424 |
| Vancomycin16 | -0.037 | -0.528 |
| Rv2680_day32 | 2.658 | 0.393 |
| H37Rv_KO_MarP | 0.758 | -0.079 |
| hypoxia_3wks | -0.136 | -0.371 |
| hypoxia_6wks | -0.192 | -0.445 |
| glycerol | -0.042 | -0.193 |
| cholesterol | -0.77 | -0.505 |
| AJ | -0.032 | -0.103 |
| Bibs02 | -0.24 | 0.134 |
| Bibs02c | -0.477 | -0.944 |
| BL6 | -1.022 | -2.398 |
| BL6a | -0.555 | -1.758 |
| BXD01 | -0.768 | -2.412 |
| BXD010 | -1.419 | -0.772 |
| BXD011 | -0.663 | -2.897 |
| BXD03 | -0.952 | -1.217 |
| BXD04 | -0.775 | -3.003 |
| BXD05 | -1.204 | -2.153 |
| BXD06 | -0.435 | -1.919 |
| BXD07 | -1.09 | -1.651 |
| BXD08 | -0.195 | -3.23 |
| BXD09 | -0.61 | -2.602 |
| CAST | -0.374 | -0.304 |
| CCcont | -0.419 | -2.18 |
| DS01 | -0.327 | 0.183 |
| DS02 | -1.035 | -0.725 |
| DS04 | 0.878 | -1.698 |
| DS0c | -0.335 | 0.682 |
| GP01 | 0.59 | -1.441 |
| GP02 | -0.011 | -1.418 |
| GP0c | -0.538 | -2.251 |
| NOD | -0.796 | -0.255 |
| NZO | -0.027 | -0.191 |
| PWK | 0.129 | 0.202 |
| H37Rv_KO_CtpC | -1.402 | -0.773 |
| H37Rv_KO_CtpD | -0.659 | 1.488 |
| H37Rv_KO_Rv1272 | -0.059 | -3.875 |
| H37Rv_KO_SugABC | 0.109 | -0.636 |
| H37Rv_KO_MbtN | -0.858 | -0.815 |
| Trans05 | -0.77 | -3.919 |
| macrophage_unactivated | -0.404 | -2.396 |
| IL1 | -0.7 | -2.477 |
| Rapamycin | 0.043 | -1.697 |
| Tcell | -1.206 | -1.401 |
| GMCSF | 0.657 | 0.734 |
| IFNab | 0.357 | -0.877 |
| IFNg | -0.072 | 0.171 |
| IFNg_GMCSF1 | 0.6 | 0.456 |
| Rv1432_day32 | 0.635 | -0.372 |
| Rv1565c_day32 | -1.339 | 0.929 |
| secA2_input | 1.885 | 2.908 |
| delta_Rv3594 | 0.805 | 2.473 |
| delta_Rv3717 | 1.013 | 1.64 |
| delta_Rv3811 | 0.638 | 2.131 |
| delta_Rv0954 | -0.155 | 1.897 |
| PonA1 | 0.682 | 1.866 |
| EccD1_KO | 0.296 | 1.02 |
| EspI_KO | 0.402 | 2.133 |
| PE35_KO | 1.561 | 1.762 |
| PPE68_KO | 0.909 | 2.662 |
| glycerol2 | 0.43 | -1.24 |
| lignocerate | 0.414 | -1.371 |
| oleate | 0.235 | -0.478 |
| phosphatidylcholine | 0.232 | -0.737 |
| acetate | 0.085 | 1.807 |
| glucAc | 0.063 | -0.734 |
| Rv0950ko | -1.369 | -0.262 |
| Rv1096ko | -0.133 | 0.663 |
| Rv3684ko | -0.766 | -0.229 |
| delta_otsA_trehalose | -0.551 | 0.711 |