Top 10 genes with highest correlation to Rv0853c/pdc:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1074c/fadA3 | (cc=0.5105) | info on Rv1074c/fadA3 |
| Rv0923c/- | (cc=0.4748) | info on Rv0923c/- |
| Rv1168c/PPE17 | (cc=0.4311) | info on Rv1168c/PPE17 |
| Rv3079c/- | (cc=0.4291) | info on Rv3079c/- |
| Rv3238c/- | (cc=0.4244) | info on Rv3238c/- |
| Rv1739c/- | (cc=0.3809) | info on Rv1739c/- |
| Rv2453c/mobA | (cc=0.3794) | info on Rv2453c/mobA |
| Rv2951c/- | (cc=0.3771) | info on Rv2951c/- |
| Rv0098/fcoT | (cc=0.3648) | info on Rv0098/fcoT |
| Rv3120/- | (cc=0.3587) | info on Rv3120/- |
Correlation of Rv0853c/pdc with Rv3079c/-
Normalized LFCs for Rv0853c/pdc:
(description and provenance of datasets)
| Rv0853c/pdc | Rv3079c/- | |
| Fe_supp_jason_reseq | -0.346 | 0.715 |
| low_pH_jason_reseq | -0.278 | 0.089 |
| NO_jason_reseq | -1.189 | -0.234 |
| B6_jason_reseq | 0.341 | 0.403 |
| MHCII_jason_reseq | 0.358 | -0.193 |
| Isoniazid02 | 0.137 | 0.391 |
| Rifampicin4 | 0.255 | 0.382 |
| Ethambutol3 | 0.663 | 0.866 |
| Meropenem3 | 0.089 | 0.178 |
| Vancomycin16 | 0.141 | 0.536 |
| Rv2680_day32 | -0.592 | 0.215 |
| H37Rv_KO_MarP | -0.135 | -0.308 |
| hypoxia_3wks | -0.407 | -0.315 |
| hypoxia_6wks | 0.238 | -0.267 |
| glycerol | -0.35 | -0.363 |
| cholesterol | -0.408 | 0.255 |
| AJ | -0.632 | -0.647 |
| Bibs02 | -0.196 | 0.668 |
| Bibs02c | -0.797 | -0.203 |
| BL6 | -0.283 | -0.473 |
| BL6a | -0.088 | -0.25 |
| BXD01 | 0.064 | 0.387 |
| BXD010 | 0.35 | 0.254 |
| BXD011 | 0.197 | -0.281 |
| BXD03 | -0.04 | -0.424 |
| BXD04 | 0.222 | -0.516 |
| BXD05 | 0.33 | -0.575 |
| BXD06 | 0.304 | 0.11 |
| BXD07 | 0.161 | -0.422 |
| BXD08 | 0.039 | 0.604 |
| BXD09 | -0.196 | -0.087 |
| CAST | -0.878 | -0.093 |
| CCcont | -0.032 | -0.794 |
| DS01 | 0.366 | -0.229 |
| DS02 | 0.581 | -0.072 |
| DS04 | 0.594 | -0.245 |
| DS0c | -0.08 | -0.058 |
| GP01 | -1.223 | -0.87 |
| GP02 | -0.166 | 0.479 |
| GP0c | -0.442 | -0.622 |
| NOD | 1.1 | -0.317 |
| NZO | -0.328 | -1.061 |
| PWK | -0.117 | 0.357 |
| H37Rv_KO_CtpC | -0.035 | 0.607 |
| H37Rv_KO_CtpD | 0.421 | 0.772 |
| H37Rv_KO_Rv1272 | 0.164 | 0.248 |
| H37Rv_KO_SugABC | 0.225 | -0.118 |
| H37Rv_KO_MbtN | 0.386 | -0.526 |
| Trans05 | 0.863 | -0.053 |
| macrophage_unactivated | 0.903 | 0.786 |
| IL1 | 0.543 | 1.308 |
| Rapamycin | 0.384 | 0.954 |
| Tcell | -0.029 | -0.186 |
| GMCSF | 0.261 | 0.779 |
| IFNab | 0.245 | 0.656 |
| IFNg | 0.147 | 1.323 |
| IFNg_GMCSF1 | 1.178 | 1.471 |
| Rv1432_day32 | 0.287 | 0.412 |
| Rv1565c_day32 | 0.077 | 0.6 |
| secA2_input | -0.363 | -1.335 |
| delta_Rv3594 | 0.54 | 0.283 |
| delta_Rv3717 | -0.083 | -0.789 |
| delta_Rv3811 | 0.4 | -0.706 |
| delta_Rv0954 | 0.017 | 0.013 |
| PonA1 | -0.015 | -0.203 |
| EccD1_KO | 0.204 | 1.161 |
| EspI_KO | 1.084 | 2.042 |
| PE35_KO | 0.268 | 1.059 |
| PPE68_KO | 0.72 | 1.193 |
| glycerol2 | 0.31 | 0.362 |
| lignocerate | 0.723 | -0.25 |
| oleate | 0.169 | 0.652 |
| phosphatidylcholine | 0.132 | 0.581 |
| acetate | -0.598 | -0.341 |
| glucAc | -0.154 | -1.227 |
| Rv0950ko | -0.567 | 0.347 |
| Rv1096ko | 0.419 | 1.059 |
| Rv3684ko | 0.147 | 0.583 |
| delta_otsA_trehalose | -0.022 | 1.549 |