Top 10 genes with highest correlation to Rv0853c/pdc:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1074c/fadA3 | (cc=0.5105) | info on Rv1074c/fadA3 |
| Rv0923c/- | (cc=0.4748) | info on Rv0923c/- |
| Rv1168c/PPE17 | (cc=0.4311) | info on Rv1168c/PPE17 |
| Rv3079c/- | (cc=0.4291) | info on Rv3079c/- |
| Rv3238c/- | (cc=0.4244) | info on Rv3238c/- |
| Rv1739c/- | (cc=0.3809) | info on Rv1739c/- |
| Rv2453c/mobA | (cc=0.3794) | info on Rv2453c/mobA |
| Rv2951c/- | (cc=0.3771) | info on Rv2951c/- |
| Rv0098/fcoT | (cc=0.3648) | info on Rv0098/fcoT |
| Rv3120/- | (cc=0.3587) | info on Rv3120/- |
Correlation of Rv0853c/pdc with Rv0098/fcoT
Normalized LFCs for Rv0853c/pdc:
(description and provenance of datasets)
| Rv0853c/pdc | Rv0098/fcoT | |
| Fe_supp_jason_reseq | -0.346 | -1.288 |
| low_pH_jason_reseq | -0.278 | -0.261 |
| NO_jason_reseq | -1.189 | -0.656 |
| B6_jason_reseq | 0.341 | -1.004 |
| MHCII_jason_reseq | 0.358 | -2.403 |
| Isoniazid02 | 0.137 | 0.173 |
| Rifampicin4 | 0.255 | -0.349 |
| Ethambutol3 | 0.663 | -0.051 |
| Meropenem3 | 0.089 | -0.21 |
| Vancomycin16 | 0.141 | 0.605 |
| Rv2680_day32 | -0.592 | -1.501 |
| H37Rv_KO_MarP | -0.135 | -0.69 |
| hypoxia_3wks | -0.407 | -0.299 |
| hypoxia_6wks | 0.238 | -0.211 |
| glycerol | -0.35 | -1.612 |
| cholesterol | -0.408 | -0.304 |
| AJ | -0.632 | -3.718 |
| Bibs02 | -0.196 | -1.042 |
| Bibs02c | -0.797 | -0.293 |
| BL6 | -0.283 | -0.936 |
| BL6a | -0.088 | -1.012 |
| BXD01 | 0.064 | -0.522 |
| BXD010 | 0.35 | -0.868 |
| BXD011 | 0.197 | -0.324 |
| BXD03 | -0.04 | -0.856 |
| BXD04 | 0.222 | 0.014 |
| BXD05 | 0.33 | -1.04 |
| BXD06 | 0.304 | -1.502 |
| BXD07 | 0.161 | -0.555 |
| BXD08 | 0.039 | 0.665 |
| BXD09 | -0.196 | -1.313 |
| CAST | -0.878 | -3.821 |
| CCcont | -0.032 | 0.884 |
| DS01 | 0.366 | 0.188 |
| DS02 | 0.581 | 2.163 |
| DS04 | 0.594 | -0.523 |
| DS0c | -0.08 | -0.132 |
| GP01 | -1.223 | -2.056 |
| GP02 | -0.166 | -1.891 |
| GP0c | -0.442 | -1.253 |
| NOD | 1.1 | -3.363 |
| NZO | -0.328 | -3.689 |
| PWK | -0.117 | -3.768 |
| H37Rv_KO_CtpC | -0.035 | -2.278 |
| H37Rv_KO_CtpD | 0.421 | 0.116 |
| H37Rv_KO_Rv1272 | 0.164 | -0.086 |
| H37Rv_KO_SugABC | 0.225 | 1.904 |
| H37Rv_KO_MbtN | 0.386 | -0.567 |
| Trans05 | 0.863 | 0.228 |
| macrophage_unactivated | 0.903 | 1.742 |
| IL1 | 0.543 | -0.801 |
| Rapamycin | 0.384 | -0.258 |
| Tcell | -0.029 | 1.007 |
| GMCSF | 0.261 | 3.332 |
| IFNab | 0.245 | 1.206 |
| IFNg | 0.147 | 0.374 |
| IFNg_GMCSF1 | 1.178 | 1.254 |
| Rv1432_day32 | 0.287 | -1.304 |
| Rv1565c_day32 | 0.077 | -1.164 |
| secA2_input | -0.363 | 0.355 |
| delta_Rv3594 | 0.54 | 0.979 |
| delta_Rv3717 | -0.083 | 0.544 |
| delta_Rv3811 | 0.4 | 1.437 |
| delta_Rv0954 | 0.017 | -0.384 |
| PonA1 | -0.015 | -1.193 |
| EccD1_KO | 0.204 | -0.105 |
| EspI_KO | 1.084 | 0.305 |
| PE35_KO | 0.268 | -0.14 |
| PPE68_KO | 0.72 | 0.15 |
| glycerol2 | 0.31 | -0.043 |
| lignocerate | 0.723 | 0.301 |
| oleate | 0.169 | -0.106 |
| phosphatidylcholine | 0.132 | 0.0 |
| acetate | -0.598 | -0.198 |
| glucAc | -0.154 | 0.042 |
| Rv0950ko | -0.567 | 0.314 |
| Rv1096ko | 0.419 | 0.314 |
| Rv3684ko | 0.147 | -0.763 |
| delta_otsA_trehalose | -0.022 | 1.894 |