Top 10 genes with highest correlation to Rv0804/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2852c/mqo | (cc=0.4915) | info on Rv2852c/mqo |
| Rv1336/cysM | (cc=0.4614) | info on Rv1336/cysM |
| Rv0131c/fadE1 | (cc=0.4569) | info on Rv0131c/fadE1 |
| Rv2970c/lipN | (cc=0.4391) | info on Rv2970c/lipN |
| Rv3033/- | (cc=0.4344) | info on Rv3033/- |
| Rv1334/mec | (cc=0.4211) | info on Rv1334/mec |
| Rv2618/- | (cc=0.417) | info on Rv2618/- |
| Rv2450c/rpfE | (cc=0.4155) | info on Rv2450c/rpfE |
| Rv0695/- | (cc=0.3842) | info on Rv0695/- |
| Rv1666c/cyp139 | (cc=0.3822) | info on Rv1666c/cyp139 |
Correlation of Rv0804/- with Rv1666c/cyp139
Normalized LFCs for Rv0804/-:
(description and provenance of datasets)
| Rv0804/- | Rv1666c/cyp139 | |
| Fe_supp_jason_reseq | -2.502 | -0.745 |
| low_pH_jason_reseq | 1.019 | -0.502 |
| NO_jason_reseq | -0.42 | -0.488 |
| B6_jason_reseq | 1.095 | 0.34 |
| MHCII_jason_reseq | -0.108 | -0.473 |
| Isoniazid02 | -0.39 | -0.163 |
| Rifampicin4 | -0.149 | -0.06 |
| Ethambutol3 | -0.137 | -0.179 |
| Meropenem3 | 0.032 | 0.576 |
| Vancomycin16 | 0.377 | -0.058 |
| Rv2680_day32 | 1.871 | -0.114 |
| H37Rv_KO_MarP | 0.109 | 0.223 |
| hypoxia_3wks | 1.575 | 0.327 |
| hypoxia_6wks | 2.007 | 0.578 |
| glycerol | 0.897 | 0.676 |
| cholesterol | 0.069 | 0.061 |
| AJ | -0.805 | -0.267 |
| Bibs02 | 0.172 | -0.236 |
| Bibs02c | -0.409 | -0.768 |
| BL6 | 0.694 | -0.12 |
| BL6a | 0.274 | -0.517 |
| BXD01 | 0.578 | 0.07 |
| BXD010 | 0.516 | -0.661 |
| BXD011 | 0.414 | -0.447 |
| BXD03 | 0.584 | 0.248 |
| BXD04 | 0.28 | -0.093 |
| BXD05 | 0.284 | -0.11 |
| BXD06 | 0.213 | -0.297 |
| BXD07 | 0.842 | -0.034 |
| BXD08 | 0.988 | 0.251 |
| BXD09 | 0.418 | -0.378 |
| CAST | -0.417 | -0.329 |
| CCcont | -0.544 | -0.698 |
| DS01 | -0.392 | -0.272 |
| DS02 | -0.195 | -0.403 |
| DS04 | 0.715 | -0.024 |
| DS0c | -0.225 | -0.5 |
| GP01 | -1.756 | -0.155 |
| GP02 | -1.818 | -1.579 |
| GP0c | -1.077 | -0.535 |
| NOD | -0.76 | 0.208 |
| NZO | -0.126 | -0.025 |
| PWK | -0.099 | -0.24 |
| H37Rv_KO_CtpC | -0.884 | -0.349 |
| H37Rv_KO_CtpD | -0.375 | 0.277 |
| H37Rv_KO_Rv1272 | -0.407 | -0.659 |
| H37Rv_KO_SugABC | 0.137 | 0.907 |
| H37Rv_KO_MbtN | 0.316 | 0.536 |
| Trans05 | 0.282 | 0.136 |
| macrophage_unactivated | -1.588 | -0.477 |
| IL1 | 0.537 | -0.81 |
| Rapamycin | -0.371 | -0.629 |
| Tcell | -0.45 | -0.189 |
| GMCSF | -0.341 | 0.246 |
| IFNab | 0.07 | -0.206 |
| IFNg | -0.021 | 0.174 |
| IFNg_GMCSF1 | 0.327 | -0.214 |
| Rv1432_day32 | 1.16 | -0.316 |
| Rv1565c_day32 | -1.749 | -0.346 |
| secA2_input | 0.368 | 0.21 |
| delta_Rv3594 | -0.84 | 0.309 |
| delta_Rv3717 | 0.609 | -0.034 |
| delta_Rv3811 | -0.538 | 0.18 |
| delta_Rv0954 | -1.107 | -0.109 |
| PonA1 | -1.146 | 0.477 |
| EccD1_KO | 0.724 | 0.28 |
| EspI_KO | 0.876 | 0.334 |
| PE35_KO | 0.242 | 0.639 |
| PPE68_KO | 0.208 | 0.771 |
| glycerol2 | -0.032 | 0.121 |
| lignocerate | -0.555 | -0.202 |
| oleate | 1.46 | 0.723 |
| phosphatidylcholine | -0.294 | 0.268 |
| acetate | 0.575 | -0.783 |
| glucAc | -1.382 | -0.965 |
| Rv0950ko | 0.519 | -0.145 |
| Rv1096ko | 0.688 | -0.042 |
| Rv3684ko | 0.147 | -1.359 |
| delta_otsA_trehalose | 0.17 | -0.827 |