Top 10 genes with highest correlation to Rv0804/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2852c/mqo | (cc=0.4915) | info on Rv2852c/mqo |
| Rv1336/cysM | (cc=0.4614) | info on Rv1336/cysM |
| Rv0131c/fadE1 | (cc=0.4569) | info on Rv0131c/fadE1 |
| Rv2970c/lipN | (cc=0.4391) | info on Rv2970c/lipN |
| Rv3033/- | (cc=0.4344) | info on Rv3033/- |
| Rv1334/mec | (cc=0.4211) | info on Rv1334/mec |
| Rv2618/- | (cc=0.417) | info on Rv2618/- |
| Rv2450c/rpfE | (cc=0.4155) | info on Rv2450c/rpfE |
| Rv0695/- | (cc=0.3842) | info on Rv0695/- |
| Rv1666c/cyp139 | (cc=0.3822) | info on Rv1666c/cyp139 |
Correlation of Rv0804/- with Rv0695/-
Normalized LFCs for Rv0804/-:
(description and provenance of datasets)
| Rv0804/- | Rv0695/- | |
| Fe_supp_jason_reseq | -2.502 | 0.289 |
| low_pH_jason_reseq | 1.019 | -0.204 |
| NO_jason_reseq | -0.42 | 0.48 |
| B6_jason_reseq | 1.095 | 1.065 |
| MHCII_jason_reseq | -0.108 | 0.899 |
| Isoniazid02 | -0.39 | -1.008 |
| Rifampicin4 | -0.149 | -0.273 |
| Ethambutol3 | -0.137 | -1.158 |
| Meropenem3 | 0.032 | -0.201 |
| Vancomycin16 | 0.377 | -0.671 |
| Rv2680_day32 | 1.871 | -0.739 |
| H37Rv_KO_MarP | 0.109 | 1.37 |
| hypoxia_3wks | 1.575 | 0.945 |
| hypoxia_6wks | 2.007 | 0.729 |
| glycerol | 0.897 | 0.69 |
| cholesterol | 0.069 | -1.887 |
| AJ | -0.805 | 0.175 |
| Bibs02 | 0.172 | -1.325 |
| Bibs02c | -0.409 | -0.703 |
| BL6 | 0.694 | -1.629 |
| BL6a | 0.274 | -0.891 |
| BXD01 | 0.578 | 0.082 |
| BXD010 | 0.516 | 0.969 |
| BXD011 | 0.414 | 0.215 |
| BXD03 | 0.584 | -0.582 |
| BXD04 | 0.28 | -0.485 |
| BXD05 | 0.284 | 0.035 |
| BXD06 | 0.213 | 0.366 |
| BXD07 | 0.842 | 0.938 |
| BXD08 | 0.988 | 0.664 |
| BXD09 | 0.418 | 0.037 |
| CAST | -0.417 | -0.692 |
| CCcont | -0.544 | -0.585 |
| DS01 | -0.392 | 0.091 |
| DS02 | -0.195 | 0.367 |
| DS04 | 0.715 | -0.36 |
| DS0c | -0.225 | 0.267 |
| GP01 | -1.756 | -2.146 |
| GP02 | -1.818 | -1.347 |
| GP0c | -1.077 | -1.884 |
| NOD | -0.76 | 1.445 |
| NZO | -0.126 | 0.738 |
| PWK | -0.099 | 0.352 |
| H37Rv_KO_CtpC | -0.884 | -0.903 |
| H37Rv_KO_CtpD | -0.375 | -2.308 |
| H37Rv_KO_Rv1272 | -0.407 | -1.972 |
| H37Rv_KO_SugABC | 0.137 | 1.106 |
| H37Rv_KO_MbtN | 0.316 | -1.803 |
| Trans05 | 0.282 | -0.947 |
| macrophage_unactivated | -1.588 | -0.83 |
| IL1 | 0.537 | 0.73 |
| Rapamycin | -0.371 | -0.043 |
| Tcell | -0.45 | -0.433 |
| GMCSF | -0.341 | -1.022 |
| IFNab | 0.07 | -1.46 |
| IFNg | -0.021 | 0.075 |
| IFNg_GMCSF1 | 0.327 | -1.772 |
| Rv1432_day32 | 1.16 | 0.0 |
| Rv1565c_day32 | -1.749 | -0.986 |
| secA2_input | 0.368 | 0.935 |
| delta_Rv3594 | -0.84 | -0.869 |
| delta_Rv3717 | 0.609 | 0.042 |
| delta_Rv3811 | -0.538 | -0.076 |
| delta_Rv0954 | -1.107 | -1.207 |
| PonA1 | -1.146 | 0.148 |
| EccD1_KO | 0.724 | -0.434 |
| EspI_KO | 0.876 | 0.211 |
| PE35_KO | 0.242 | 0.146 |
| PPE68_KO | 0.208 | -0.083 |
| glycerol2 | -0.032 | -0.391 |
| lignocerate | -0.555 | -1.95 |
| oleate | 1.46 | 0.866 |
| phosphatidylcholine | -0.294 | -0.473 |
| acetate | 0.575 | -0.77 |
| glucAc | -1.382 | -1.812 |
| Rv0950ko | 0.519 | 0.971 |
| Rv1096ko | 0.688 | 1.043 |
| Rv3684ko | 0.147 | -0.2 |
| delta_otsA_trehalose | 0.17 | -0.15 |