Top 10 genes with highest correlation to Rv0784/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1331/- | (cc=0.5182) | info on Rv1331/- |
| Rv1541c/lprI | (cc=0.4815) | info on Rv1541c/lprI |
| Rv3556c/fadA6 | (cc=0.447) | info on Rv3556c/fadA6 |
| Rv3536c/hsaE | (cc=0.4457) | info on Rv3536c/hsaE |
| Rv1208/gpgS | (cc=0.4448) | info on Rv1208/gpgS |
| Rv2912c/- | (cc=0.4321) | info on Rv2912c/- |
| Rv0411c/glnH | (cc=0.4203) | info on Rv0411c/glnH |
| Rv1282c/oppC | (cc=0.4189) | info on Rv1282c/oppC |
| Rv0837c/- | (cc=0.4186) | info on Rv0837c/- |
| Rv2380c/mbtE | (cc=0.4166) | info on Rv2380c/mbtE |
Correlation of Rv0784/- with Rv2912c/-
Normalized LFCs for Rv0784/-:
(description and provenance of datasets)
| Rv0784/- | Rv2912c/- | |
| Fe_supp_jason_reseq | 0.83 | -1.733 |
| low_pH_jason_reseq | 1.673 | 1.947 |
| NO_jason_reseq | 1.053 | -0.599 |
| B6_jason_reseq | 1.077 | -1.679 |
| MHCII_jason_reseq | -0.315 | -1.262 |
| Isoniazid02 | 0.0 | -1.231 |
| Rifampicin4 | 1.394 | 0.154 |
| Ethambutol3 | 0.235 | -0.43 |
| Meropenem3 | 0.35 | -0.406 |
| Vancomycin16 | 0.899 | -0.459 |
| Rv2680_day32 | 0.023 | -0.704 |
| H37Rv_KO_MarP | 0.936 | -0.078 |
| hypoxia_3wks | -1.101 | -0.873 |
| hypoxia_6wks | 0.0 | -1.13 |
| glycerol | -0.108 | 0.025 |
| cholesterol | -0.246 | 0.054 |
| AJ | 0.0 | -0.308 |
| Bibs02 | 0.348 | 0.174 |
| Bibs02c | -0.629 | -0.43 |
| BL6 | -0.212 | -1.072 |
| BL6a | 0.1 | -0.877 |
| BXD01 | 0.066 | -0.734 |
| BXD010 | -0.478 | -0.302 |
| BXD011 | -0.297 | -0.639 |
| BXD03 | -0.072 | -1.893 |
| BXD04 | -0.372 | -1.374 |
| BXD05 | -0.405 | -0.621 |
| BXD06 | 0.566 | -0.902 |
| BXD07 | -0.517 | -1.148 |
| BXD08 | 1.856 | -0.086 |
| BXD09 | -0.075 | -1.562 |
| CAST | -0.692 | -1.785 |
| CCcont | 0.633 | 0.956 |
| DS01 | 0.45 | 0.252 |
| DS02 | 1.207 | 0.811 |
| DS04 | 1.456 | 0.672 |
| DS0c | 0.762 | 0.08 |
| GP01 | 0.099 | -0.667 |
| GP02 | 0.323 | -0.278 |
| GP0c | 0.248 | -2.019 |
| NOD | -0.675 | 0.239 |
| NZO | 1.107 | -1.396 |
| PWK | 0.0 | -1.063 |
| H37Rv_KO_CtpC | 1.219 | -0.215 |
| H37Rv_KO_CtpD | 0.241 | 0.244 |
| H37Rv_KO_Rv1272 | 1.321 | -0.707 |
| H37Rv_KO_SugABC | 2.627 | 0.46 |
| H37Rv_KO_MbtN | 0.437 | -0.603 |
| Trans05 | 1.43 | -0.23 |
| macrophage_unactivated | 3.156 | 0.426 |
| IL1 | 0.19 | -1.038 |
| Rapamycin | -0.424 | -0.267 |
| Tcell | -0.218 | -1.14 |
| GMCSF | 1.18 | 0.145 |
| IFNab | 1.052 | 0.635 |
| IFNg | 3.009 | 1.328 |
| IFNg_GMCSF1 | 1.555 | -0.773 |
| Rv1432_day32 | 0.0 | -2.009 |
| Rv1565c_day32 | 1.633 | -1.422 |
| secA2_input | -1.498 | 0.603 |
| delta_Rv3594 | 2.324 | -0.479 |
| delta_Rv3717 | 1.375 | -0.167 |
| delta_Rv3811 | 0.721 | -0.849 |
| delta_Rv0954 | 1.292 | -0.035 |
| PonA1 | 2.829 | 0.121 |
| EccD1_KO | 1.993 | 0.431 |
| EspI_KO | 1.842 | -1.075 |
| PE35_KO | 2.535 | 0.761 |
| PPE68_KO | 2.438 | 0.806 |
| glycerol2 | 0.238 | -0.803 |
| lignocerate | 1.271 | -0.192 |
| oleate | -0.961 | -1.093 |
| phosphatidylcholine | 0.549 | -0.513 |
| acetate | 1.662 | 0.973 |
| glucAc | 1.607 | 0.954 |
| Rv0950ko | -0.416 | 0.712 |
| Rv1096ko | 1.632 | 0.338 |
| Rv3684ko | 3.347 | -0.193 |
| delta_otsA_trehalose | -1.121 | -0.482 |