Top 10 genes with highest correlation to Rv0751c/mmsB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0906/- | (cc=0.4072) | info on Rv0906/- |
| Rv2497c/bkdA | (cc=0.3935) | info on Rv2497c/bkdA |
| Rv1498c/- | (cc=0.3933) | info on Rv1498c/- |
| Rv1106c/- | (cc=0.3873) | info on Rv1106c/- |
| Rv0479c/- | (cc=0.3837) | info on Rv0479c/- |
| Rv0596c/vapB4 | (cc=0.3813) | info on Rv0596c/vapB4 |
| Rv0934/pstS1 | (cc=0.3776) | info on Rv0934/pstS1 |
| Rv1489A/- | (cc=0.3772) | info on Rv1489A/- |
| Rv0789c/- | (cc=0.3762) | info on Rv0789c/- |
| Rv1473A/- | (cc=0.375) | info on Rv1473A/- |
Correlation of Rv0751c/mmsB with Rv0596c/vapB4
Normalized LFCs for Rv0751c/mmsB:
(description and provenance of datasets)
| Rv0751c/mmsB | Rv0596c/vapB4 | |
| Fe_supp_jason_reseq | 1.301 | 1.514 |
| low_pH_jason_reseq | 2.32 | 2.212 |
| NO_jason_reseq | 0.515 | 0.929 |
| B6_jason_reseq | -0.483 | -0.941 |
| MHCII_jason_reseq | 0.703 | -0.694 |
| Isoniazid02 | -1.295 | -0.422 |
| Rifampicin4 | -0.929 | -0.642 |
| Ethambutol3 | -1.402 | -0.418 |
| Meropenem3 | -0.446 | -0.701 |
| Vancomycin16 | -1.175 | -0.058 |
| Rv2680_day32 | -0.28 | 0.0 |
| H37Rv_KO_MarP | -0.154 | -1.892 |
| hypoxia_3wks | -0.482 | -0.383 |
| hypoxia_6wks | -0.495 | -0.647 |
| glycerol | -0.913 | 0.0 |
| cholesterol | -0.302 | 0.614 |
| AJ | -0.079 | 0.0 |
| Bibs02 | 0.498 | 0.0 |
| Bibs02c | 0.243 | 0.0 |
| BL6 | 0.403 | 1.56 |
| BL6a | 1.062 | 1.812 |
| BXD01 | 0.732 | 3.134 |
| BXD010 | 0.161 | 0.543 |
| BXD011 | 0.325 | 5.511 |
| BXD03 | 0.143 | 0.573 |
| BXD04 | -0.381 | 2.0 |
| BXD05 | -0.356 | 0.975 |
| BXD06 | 0.474 | 3.62 |
| BXD07 | 0.424 | 2.042 |
| BXD08 | 0.1 | 3.186 |
| BXD09 | 0.442 | 2.073 |
| CAST | 0.025 | 0.0 |
| CCcont | 1.24 | 3.48 |
| DS01 | 0.366 | 0.0 |
| DS02 | -1.098 | 0.0 |
| DS04 | -0.843 | 0.194 |
| DS0c | 0.377 | 0.919 |
| GP01 | -0.807 | 1.35 |
| GP02 | 0.212 | 0.159 |
| GP0c | 0.274 | 1.132 |
| NOD | -0.726 | 0.0 |
| NZO | 0.25 | 0.0 |
| PWK | -0.159 | 0.0 |
| H37Rv_KO_CtpC | 0.22 | 0.998 |
| H37Rv_KO_CtpD | -0.918 | 0.0 |
| H37Rv_KO_Rv1272 | 0.121 | 1.022 |
| H37Rv_KO_SugABC | 1.18 | 0.099 |
| H37Rv_KO_MbtN | -1.842 | 1.546 |
| Trans05 | 1.28 | 1.672 |
| macrophage_unactivated | 0.287 | 0.83 |
| IL1 | 0.522 | 0.122 |
| Rapamycin | 0.641 | 0.307 |
| Tcell | -0.124 | 1.678 |
| GMCSF | -0.364 | -0.919 |
| IFNab | 1.052 | -0.323 |
| IFNg | -0.369 | -0.791 |
| IFNg_GMCSF1 | 0.808 | -1.26 |
| Rv1432_day32 | -0.176 | 0.0 |
| Rv1565c_day32 | -1.279 | 0.0 |
| secA2_input | 0.801 | 1.608 |
| delta_Rv3594 | -0.84 | -1.15 |
| delta_Rv3717 | 0.513 | -0.853 |
| delta_Rv3811 | 0.735 | -1.933 |
| delta_Rv0954 | -0.601 | -0.615 |
| PonA1 | -0.359 | 0.452 |
| EccD1_KO | -0.207 | 0.0 |
| EspI_KO | 1.654 | -0.2 |
| PE35_KO | 1.073 | 1.21 |
| PPE68_KO | 0.816 | 1.648 |
| glycerol2 | 0.384 | 2.9 |
| lignocerate | 1.109 | 3.058 |
| oleate | 0.337 | 0.0 |
| phosphatidylcholine | 0.396 | 2.644 |
| acetate | 0.396 | 3.955 |
| glucAc | 1.759 | 3.101 |
| Rv0950ko | -0.28 | -1.764 |
| Rv1096ko | -0.103 | -0.335 |
| Rv3684ko | 0.75 | 0.652 |
| delta_otsA_trehalose | -0.868 | 0.254 |