Top 10 genes with highest correlation to Rv0751c/mmsB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0906/- | (cc=0.4072) | info on Rv0906/- |
| Rv2497c/bkdA | (cc=0.3935) | info on Rv2497c/bkdA |
| Rv1498c/- | (cc=0.3933) | info on Rv1498c/- |
| Rv1106c/- | (cc=0.3873) | info on Rv1106c/- |
| Rv0479c/- | (cc=0.3837) | info on Rv0479c/- |
| Rv0596c/vapB4 | (cc=0.3813) | info on Rv0596c/vapB4 |
| Rv0934/pstS1 | (cc=0.3776) | info on Rv0934/pstS1 |
| Rv1489A/- | (cc=0.3772) | info on Rv1489A/- |
| Rv0789c/- | (cc=0.3762) | info on Rv0789c/- |
| Rv1473A/- | (cc=0.375) | info on Rv1473A/- |
Correlation of Rv0751c/mmsB with Rv0906/-
Normalized LFCs for Rv0751c/mmsB:
(description and provenance of datasets)
| Rv0751c/mmsB | Rv0906/- | |
| Fe_supp_jason_reseq | 1.301 | -0.122 |
| low_pH_jason_reseq | 2.32 | -0.447 |
| NO_jason_reseq | 0.515 | 0.05 |
| B6_jason_reseq | -0.483 | 0.776 |
| MHCII_jason_reseq | 0.703 | 1.057 |
| Isoniazid02 | -1.295 | -3.102 |
| Rifampicin4 | -0.929 | 0.433 |
| Ethambutol3 | -1.402 | -2.783 |
| Meropenem3 | -0.446 | -1.412 |
| Vancomycin16 | -1.175 | -0.836 |
| Rv2680_day32 | -0.28 | -1.398 |
| H37Rv_KO_MarP | -0.154 | 0.48 |
| hypoxia_3wks | -0.482 | -0.371 |
| hypoxia_6wks | -0.495 | 0.027 |
| glycerol | -0.913 | -0.176 |
| cholesterol | -0.302 | -0.171 |
| AJ | -0.079 | -0.185 |
| Bibs02 | 0.498 | 0.261 |
| Bibs02c | 0.243 | 0.54 |
| BL6 | 0.403 | -0.728 |
| BL6a | 1.062 | -0.641 |
| BXD01 | 0.732 | -0.511 |
| BXD010 | 0.161 | -0.584 |
| BXD011 | 0.325 | -0.308 |
| BXD03 | 0.143 | -0.753 |
| BXD04 | -0.381 | -0.146 |
| BXD05 | -0.356 | -0.734 |
| BXD06 | 0.474 | -0.552 |
| BXD07 | 0.424 | -0.573 |
| BXD08 | 0.1 | 0.01 |
| BXD09 | 0.442 | -0.999 |
| CAST | 0.025 | -0.272 |
| CCcont | 1.24 | -0.648 |
| DS01 | 0.366 | 0.748 |
| DS02 | -1.098 | 0.271 |
| DS04 | -0.843 | 0.978 |
| DS0c | 0.377 | 0.773 |
| GP01 | -0.807 | -0.832 |
| GP02 | 0.212 | -0.484 |
| GP0c | 0.274 | -0.51 |
| NOD | -0.726 | -0.882 |
| NZO | 0.25 | -0.071 |
| PWK | -0.159 | -0.915 |
| H37Rv_KO_CtpC | 0.22 | -1.154 |
| H37Rv_KO_CtpD | -0.918 | -0.768 |
| H37Rv_KO_Rv1272 | 0.121 | -0.908 |
| H37Rv_KO_SugABC | 1.18 | 0.718 |
| H37Rv_KO_MbtN | -1.842 | -1.808 |
| Trans05 | 1.28 | -0.667 |
| macrophage_unactivated | 0.287 | 0.322 |
| IL1 | 0.522 | 0.0 |
| Rapamycin | 0.641 | -0.948 |
| Tcell | -0.124 | 0.042 |
| GMCSF | -0.364 | -1.373 |
| IFNab | 1.052 | -0.29 |
| IFNg | -0.369 | -0.695 |
| IFNg_GMCSF1 | 0.808 | -0.126 |
| Rv1432_day32 | -0.176 | 0.091 |
| Rv1565c_day32 | -1.279 | -2.147 |
| secA2_input | 0.801 | 0.686 |
| delta_Rv3594 | -0.84 | -0.154 |
| delta_Rv3717 | 0.513 | -0.223 |
| delta_Rv3811 | 0.735 | -0.311 |
| delta_Rv0954 | -0.601 | 0.342 |
| PonA1 | -0.359 | -1.002 |
| EccD1_KO | -0.207 | -0.059 |
| EspI_KO | 1.654 | 0.342 |
| PE35_KO | 1.073 | -0.735 |
| PPE68_KO | 0.816 | -0.234 |
| glycerol2 | 0.384 | 0.629 |
| lignocerate | 1.109 | 1.801 |
| oleate | 0.337 | 0.115 |
| phosphatidylcholine | 0.396 | 0.845 |
| acetate | 0.396 | 1.616 |
| glucAc | 1.759 | 1.629 |
| Rv0950ko | -0.28 | 0.075 |
| Rv1096ko | -0.103 | 1.912 |
| Rv3684ko | 0.75 | 0.681 |
| delta_otsA_trehalose | -0.868 | -1.112 |