Top 10 genes with highest correlation to Rv0688/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0933/pstB | (cc=0.5353) | info on Rv0933/pstB |
| Rv0914c/- | (cc=0.5016) | info on Rv0914c/- |
| Rv3180c/- | (cc=0.4754) | info on Rv3180c/- |
| Rv3681c/whiB4 | (cc=0.4722) | info on Rv3681c/whiB4 |
| Rv2072c/cobL | (cc=0.4715) | info on Rv2072c/cobL |
| Rv1351/- | (cc=0.4602) | info on Rv1351/- |
| Rv1708/- | (cc=0.4517) | info on Rv1708/- |
| Rv1144/- | (cc=0.4339) | info on Rv1144/- |
| Rv0213c/- | (cc=0.4263) | info on Rv0213c/- |
| Rv3640c/- | (cc=0.4259) | info on Rv3640c/- |
Correlation of Rv0688/- with Rv3640c/-
Normalized LFCs for Rv0688/-:
(description and provenance of datasets)
| Rv0688/- | Rv3640c/- | |
| Fe_supp_jason_reseq | 0.412 | 0.845 |
| low_pH_jason_reseq | 0.994 | 0.304 |
| NO_jason_reseq | 0.625 | 0.872 |
| B6_jason_reseq | 0.83 | 0.396 |
| MHCII_jason_reseq | 1.135 | 0.726 |
| Isoniazid02 | 0.084 | -0.135 |
| Rifampicin4 | 0.482 | -0.628 |
| Ethambutol3 | -0.495 | -0.315 |
| Meropenem3 | -0.379 | -0.231 |
| Vancomycin16 | 0.443 | -0.183 |
| Rv2680_day32 | 0.019 | -1.17 |
| H37Rv_KO_MarP | 0.313 | 0.483 |
| hypoxia_3wks | 0.901 | 0.542 |
| hypoxia_6wks | -0.115 | 0.0 |
| glycerol | -0.881 | -0.376 |
| cholesterol | -0.545 | -0.221 |
| AJ | -0.454 | -0.432 |
| Bibs02 | 0.058 | -0.469 |
| Bibs02c | 0.388 | 0.418 |
| BL6 | 0.03 | -0.516 |
| BL6a | -0.293 | -0.116 |
| BXD01 | 0.082 | -0.862 |
| BXD010 | 0.061 | -0.075 |
| BXD011 | 0.118 | -0.473 |
| BXD03 | -0.305 | -0.347 |
| BXD04 | 0.049 | -0.551 |
| BXD05 | -0.09 | -1.024 |
| BXD06 | -0.314 | -0.249 |
| BXD07 | -0.218 | -0.201 |
| BXD08 | 0.424 | -0.973 |
| BXD09 | -0.777 | -0.453 |
| CAST | 0.145 | -0.083 |
| CCcont | -0.221 | -0.466 |
| DS01 | 0.917 | -0.034 |
| DS02 | 0.939 | -0.405 |
| DS04 | 0.838 | 0.082 |
| DS0c | 0.731 | -0.244 |
| GP01 | -0.978 | -0.842 |
| GP02 | -0.86 | -1.132 |
| GP0c | 0.091 | -0.565 |
| NOD | 0.757 | 0.395 |
| NZO | -0.257 | -0.932 |
| PWK | 0.24 | -0.057 |
| H37Rv_KO_CtpC | -0.574 | -0.402 |
| H37Rv_KO_CtpD | -0.063 | 0.904 |
| H37Rv_KO_Rv1272 | 0.704 | 0.019 |
| H37Rv_KO_SugABC | 0.603 | -0.103 |
| H37Rv_KO_MbtN | -1.289 | -1.826 |
| Trans05 | -0.022 | 0.261 |
| macrophage_unactivated | 0.047 | -0.644 |
| IL1 | -0.475 | -1.356 |
| Rapamycin | 0.046 | -1.642 |
| Tcell | -0.469 | -1.489 |
| GMCSF | -1.505 | 0.285 |
| IFNab | -0.973 | -1.155 |
| IFNg | -0.615 | -0.869 |
| IFNg_GMCSF1 | -0.047 | -1.291 |
| Rv1432_day32 | 0.465 | 0.244 |
| Rv1565c_day32 | -0.098 | -0.924 |
| secA2_input | 0.307 | -0.183 |
| delta_Rv3594 | -0.291 | -0.337 |
| delta_Rv3717 | 0.271 | -0.133 |
| delta_Rv3811 | 0.913 | -0.51 |
| delta_Rv0954 | -0.41 | 0.996 |
| PonA1 | 0.335 | 0.02 |
| EccD1_KO | 0.286 | 0.286 |
| EspI_KO | 0.328 | -0.847 |
| PE35_KO | -0.414 | 0.324 |
| PPE68_KO | 0.0 | -0.339 |
| glycerol2 | -0.014 | 0.319 |
| lignocerate | -0.049 | 0.0 |
| oleate | -0.189 | -0.408 |
| phosphatidylcholine | 0.28 | 0.167 |
| acetate | 0.186 | -0.291 |
| glucAc | -0.301 | -0.369 |
| Rv0950ko | 0.193 | 0.449 |
| Rv1096ko | 0.555 | 1.083 |
| Rv3684ko | 0.413 | 0.102 |
| delta_otsA_trehalose | -1.343 | -0.383 |