Top 10 genes with highest correlation to Rv0688/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0933/pstB | (cc=0.5353) | info on Rv0933/pstB |
| Rv0914c/- | (cc=0.5016) | info on Rv0914c/- |
| Rv3180c/- | (cc=0.4754) | info on Rv3180c/- |
| Rv3681c/whiB4 | (cc=0.4722) | info on Rv3681c/whiB4 |
| Rv2072c/cobL | (cc=0.4715) | info on Rv2072c/cobL |
| Rv1351/- | (cc=0.4602) | info on Rv1351/- |
| Rv1708/- | (cc=0.4517) | info on Rv1708/- |
| Rv1144/- | (cc=0.4339) | info on Rv1144/- |
| Rv0213c/- | (cc=0.4263) | info on Rv0213c/- |
| Rv3640c/- | (cc=0.4259) | info on Rv3640c/- |
Correlation of Rv0688/- with Rv1351/-
Normalized LFCs for Rv0688/-:
(description and provenance of datasets)
| Rv0688/- | Rv1351/- | |
| Fe_supp_jason_reseq | 0.412 | 1.97 |
| low_pH_jason_reseq | 0.994 | -1.884 |
| NO_jason_reseq | 0.625 | 0.583 |
| B6_jason_reseq | 0.83 | 1.886 |
| MHCII_jason_reseq | 1.135 | 3.143 |
| Isoniazid02 | 0.084 | 0.052 |
| Rifampicin4 | 0.482 | -0.303 |
| Ethambutol3 | -0.495 | -0.185 |
| Meropenem3 | -0.379 | 0.043 |
| Vancomycin16 | 0.443 | 0.451 |
| Rv2680_day32 | 0.019 | 2.461 |
| H37Rv_KO_MarP | 0.313 | -0.969 |
| hypoxia_3wks | 0.901 | -0.57 |
| hypoxia_6wks | -0.115 | -1.52 |
| glycerol | -0.881 | -0.099 |
| cholesterol | -0.545 | -0.227 |
| AJ | -0.454 | -0.286 |
| Bibs02 | 0.058 | 0.715 |
| Bibs02c | 0.388 | 1.325 |
| BL6 | 0.03 | -0.062 |
| BL6a | -0.293 | 0.814 |
| BXD01 | 0.082 | 0.893 |
| BXD010 | 0.061 | 0.217 |
| BXD011 | 0.118 | -0.805 |
| BXD03 | -0.305 | -1.439 |
| BXD04 | 0.049 | -0.309 |
| BXD05 | -0.09 | -0.715 |
| BXD06 | -0.314 | -0.135 |
| BXD07 | -0.218 | -0.587 |
| BXD08 | 0.424 | 0.564 |
| BXD09 | -0.777 | -0.769 |
| CAST | 0.145 | 0.274 |
| CCcont | -0.221 | 0.0 |
| DS01 | 0.917 | 0.176 |
| DS02 | 0.939 | 0.807 |
| DS04 | 0.838 | -0.115 |
| DS0c | 0.731 | 0.76 |
| GP01 | -0.978 | -1.908 |
| GP02 | -0.86 | -1.986 |
| GP0c | 0.091 | -0.993 |
| NOD | 0.757 | 1.375 |
| NZO | -0.257 | -0.996 |
| PWK | 0.24 | -0.54 |
| H37Rv_KO_CtpC | -0.574 | -0.712 |
| H37Rv_KO_CtpD | -0.063 | -1.188 |
| H37Rv_KO_Rv1272 | 0.704 | 0.227 |
| H37Rv_KO_SugABC | 0.603 | -1.326 |
| H37Rv_KO_MbtN | -1.289 | -0.31 |
| Trans05 | -0.022 | -0.849 |
| macrophage_unactivated | 0.047 | -0.237 |
| IL1 | -0.475 | -3.85 |
| Rapamycin | 0.046 | -2.44 |
| Tcell | -0.469 | -0.244 |
| GMCSF | -1.505 | -2.978 |
| IFNab | -0.973 | -2.403 |
| IFNg | -0.615 | -2.48 |
| IFNg_GMCSF1 | -0.047 | -0.751 |
| Rv1432_day32 | 0.465 | -0.623 |
| Rv1565c_day32 | -0.098 | 0.242 |
| secA2_input | 0.307 | 0.1 |
| delta_Rv3594 | -0.291 | 0.196 |
| delta_Rv3717 | 0.271 | -0.331 |
| delta_Rv3811 | 0.913 | 0.526 |
| delta_Rv0954 | -0.41 | 0.756 |
| PonA1 | 0.335 | 0.335 |
| EccD1_KO | 0.286 | 0.355 |
| EspI_KO | 0.328 | -0.163 |
| PE35_KO | -0.414 | -0.341 |
| PPE68_KO | 0.0 | -0.643 |
| glycerol2 | -0.014 | -0.68 |
| lignocerate | -0.049 | -0.257 |
| oleate | -0.189 | 0.147 |
| phosphatidylcholine | 0.28 | 0.158 |
| acetate | 0.186 | -0.066 |
| glucAc | -0.301 | -0.446 |
| Rv0950ko | 0.193 | -1.11 |
| Rv1096ko | 0.555 | 0.078 |
| Rv3684ko | 0.413 | 0.485 |
| delta_otsA_trehalose | -1.343 | 0.378 |