Top 10 genes with highest correlation to Rv0681/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2564/glnQ | (cc=0.5182) | info on Rv2564/glnQ |
| Rv2912c/- | (cc=0.4861) | info on Rv2912c/- |
| Rv3574/kstR | (cc=0.4845) | info on Rv3574/kstR |
| Rv2380c/mbtE | (cc=0.4812) | info on Rv2380c/mbtE |
| Rv2386c/mbtI | (cc=0.4791) | info on Rv2386c/mbtI |
| Rv2383c/mbtB | (cc=0.4787) | info on Rv2383c/mbtB |
| Rv0981/mprA | (cc=0.4594) | info on Rv0981/mprA |
| Rv2379c/mbtF | (cc=0.4468) | info on Rv2379c/mbtF |
| Rv0296c/- | (cc=0.4445) | info on Rv0296c/- |
| Rv3666c/dppA | (cc=0.4277) | info on Rv3666c/dppA |
Correlation of Rv0681/- with Rv3574/kstR
Normalized LFCs for Rv0681/-:
(description and provenance of datasets)
| Rv0681/- | Rv3574/kstR | |
| Fe_supp_jason_reseq | 0.229 | 0.63 |
| low_pH_jason_reseq | 1.236 | 0.107 |
| NO_jason_reseq | -0.221 | -1.993 |
| B6_jason_reseq | -0.529 | -1.263 |
| MHCII_jason_reseq | -0.412 | -0.977 |
| Isoniazid02 | -0.831 | -1.085 |
| Rifampicin4 | -0.471 | 0.219 |
| Ethambutol3 | 0.623 | -0.333 |
| Meropenem3 | 0.05 | -0.068 |
| Vancomycin16 | -0.868 | -0.639 |
| Rv2680_day32 | -0.641 | -1.625 |
| H37Rv_KO_MarP | 0.988 | 0.154 |
| hypoxia_3wks | -1.595 | -1.87 |
| hypoxia_6wks | -1.23 | -1.483 |
| glycerol | -0.821 | 0.721 |
| cholesterol | -0.444 | -0.31 |
| AJ | -1.003 | -1.269 |
| Bibs02 | -0.317 | -1.715 |
| Bibs02c | -0.305 | -1.963 |
| BL6 | -0.108 | -1.298 |
| BL6a | -0.096 | -1.512 |
| BXD01 | -0.42 | -1.222 |
| BXD010 | -0.23 | -1.329 |
| BXD011 | -0.683 | -0.782 |
| BXD03 | -0.821 | -1.404 |
| BXD04 | -1.043 | -1.16 |
| BXD05 | 0.253 | -1.397 |
| BXD06 | -0.453 | -1.131 |
| BXD07 | -0.886 | -1.299 |
| BXD08 | -0.529 | -1.381 |
| BXD09 | -0.839 | -1.318 |
| CAST | 0.08 | -1.582 |
| CCcont | 0.151 | 0.533 |
| DS01 | 0.731 | -0.867 |
| DS02 | -0.961 | -1.051 |
| DS04 | 1.162 | -0.325 |
| DS0c | 0.594 | 1.001 |
| GP01 | -1.436 | -1.025 |
| GP02 | 0.061 | -0.864 |
| GP0c | -1.185 | -1.35 |
| NOD | -0.602 | -0.591 |
| NZO | -1.108 | -1.691 |
| PWK | -0.713 | -1.205 |
| H37Rv_KO_CtpC | -0.604 | -1.24 |
| H37Rv_KO_CtpD | 0.667 | -0.465 |
| H37Rv_KO_Rv1272 | -0.284 | -1.323 |
| H37Rv_KO_SugABC | 0.311 | -1.028 |
| H37Rv_KO_MbtN | 0.359 | -0.787 |
| Trans05 | 0.082 | -1.226 |
| macrophage_unactivated | 0.619 | 0.363 |
| IL1 | -0.673 | -0.78 |
| Rapamycin | -0.153 | -0.807 |
| Tcell | 0.844 | 0.0 |
| GMCSF | 0.602 | -0.694 |
| IFNab | 1.113 | -0.795 |
| IFNg | -0.273 | -0.337 |
| IFNg_GMCSF1 | -0.28 | -0.396 |
| Rv1432_day32 | -0.634 | -1.106 |
| Rv1565c_day32 | -1.7 | -0.981 |
| secA2_input | 0.949 | -0.551 |
| delta_Rv3594 | -0.229 | -2.709 |
| delta_Rv3717 | -1.433 | -3.019 |
| delta_Rv3811 | -0.598 | -2.763 |
| delta_Rv0954 | 0.252 | 0.377 |
| PonA1 | 1.11 | 0.264 |
| EccD1_KO | 1.026 | -1.644 |
| EspI_KO | 0.799 | 0.468 |
| PE35_KO | -0.207 | 0.347 |
| PPE68_KO | -0.33 | -0.246 |
| glycerol2 | -0.286 | -0.611 |
| lignocerate | 0.181 | -0.751 |
| oleate | -1.109 | -1.704 |
| phosphatidylcholine | -0.129 | -0.496 |
| acetate | 0.377 | 1.327 |
| glucAc | 0.225 | 0.0 |
| Rv0950ko | -0.139 | 0.657 |
| Rv1096ko | -0.208 | -0.772 |
| Rv3684ko | -0.891 | -1.395 |
| delta_otsA_trehalose | -0.385 | -0.103 |