Top 10 genes with highest correlation to Rv0681/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2564/glnQ | (cc=0.5182) | info on Rv2564/glnQ |
| Rv2912c/- | (cc=0.4861) | info on Rv2912c/- |
| Rv3574/kstR | (cc=0.4845) | info on Rv3574/kstR |
| Rv2380c/mbtE | (cc=0.4812) | info on Rv2380c/mbtE |
| Rv2386c/mbtI | (cc=0.4791) | info on Rv2386c/mbtI |
| Rv2383c/mbtB | (cc=0.4787) | info on Rv2383c/mbtB |
| Rv0981/mprA | (cc=0.4594) | info on Rv0981/mprA |
| Rv2379c/mbtF | (cc=0.4468) | info on Rv2379c/mbtF |
| Rv0296c/- | (cc=0.4445) | info on Rv0296c/- |
| Rv3666c/dppA | (cc=0.4277) | info on Rv3666c/dppA |
Correlation of Rv0681/- with Rv2564/glnQ
Normalized LFCs for Rv0681/-:
(description and provenance of datasets)
| Rv0681/- | Rv2564/glnQ | |
| Fe_supp_jason_reseq | 0.229 | 2.013 |
| low_pH_jason_reseq | 1.236 | -0.333 |
| NO_jason_reseq | -0.221 | -1.853 |
| B6_jason_reseq | -0.529 | -1.519 |
| MHCII_jason_reseq | -0.412 | -0.932 |
| Isoniazid02 | -0.831 | 0.036 |
| Rifampicin4 | -0.471 | -2.134 |
| Ethambutol3 | 0.623 | 1.918 |
| Meropenem3 | 0.05 | 0.649 |
| Vancomycin16 | -0.868 | -0.578 |
| Rv2680_day32 | -0.641 | -2.923 |
| H37Rv_KO_MarP | 0.988 | 0.621 |
| hypoxia_3wks | -1.595 | -3.038 |
| hypoxia_6wks | -1.23 | -2.011 |
| glycerol | -0.821 | 0.676 |
| cholesterol | -0.444 | 0.44 |
| AJ | -1.003 | -3.514 |
| Bibs02 | -0.317 | -2.262 |
| Bibs02c | -0.305 | 0.652 |
| BL6 | -0.108 | -2.64 |
| BL6a | -0.096 | -1.086 |
| BXD01 | -0.42 | -3.107 |
| BXD010 | -0.23 | -1.829 |
| BXD011 | -0.683 | -2.911 |
| BXD03 | -0.821 | -1.721 |
| BXD04 | -1.043 | -2.264 |
| BXD05 | 0.253 | -3.076 |
| BXD06 | -0.453 | -2.714 |
| BXD07 | -0.886 | -2.716 |
| BXD08 | -0.529 | -2.704 |
| BXD09 | -0.839 | -3.352 |
| CAST | 0.08 | -0.429 |
| CCcont | 0.151 | 0.355 |
| DS01 | 0.731 | 2.322 |
| DS02 | -0.961 | 0.607 |
| DS04 | 1.162 | 2.805 |
| DS0c | 0.594 | 1.673 |
| GP01 | -1.436 | -2.355 |
| GP02 | 0.061 | -1.985 |
| GP0c | -1.185 | -3.102 |
| NOD | -0.602 | 0.552 |
| NZO | -1.108 | -2.766 |
| PWK | -0.713 | 1.212 |
| H37Rv_KO_CtpC | -0.604 | -0.95 |
| H37Rv_KO_CtpD | 0.667 | -0.764 |
| H37Rv_KO_Rv1272 | -0.284 | -1.846 |
| H37Rv_KO_SugABC | 0.311 | -1.5 |
| H37Rv_KO_MbtN | 0.359 | -1.952 |
| Trans05 | 0.082 | -2.986 |
| macrophage_unactivated | 0.619 | 0.947 |
| IL1 | -0.673 | -1.818 |
| Rapamycin | -0.153 | -0.543 |
| Tcell | 0.844 | 0.0 |
| GMCSF | 0.602 | 0.671 |
| IFNab | 1.113 | 0.163 |
| IFNg | -0.273 | -1.013 |
| IFNg_GMCSF1 | -0.28 | -0.179 |
| Rv1432_day32 | -0.634 | -3.206 |
| Rv1565c_day32 | -1.7 | -0.509 |
| secA2_input | 0.949 | -1.198 |
| delta_Rv3594 | -0.229 | -2.272 |
| delta_Rv3717 | -1.433 | -1.869 |
| delta_Rv3811 | -0.598 | -1.817 |
| delta_Rv0954 | 0.252 | 1.292 |
| PonA1 | 1.11 | 2.505 |
| EccD1_KO | 1.026 | 0.0 |
| EspI_KO | 0.799 | -0.274 |
| PE35_KO | -0.207 | 1.126 |
| PPE68_KO | -0.33 | 0.816 |
| glycerol2 | -0.286 | -1.572 |
| lignocerate | 0.181 | -0.049 |
| oleate | -1.109 | -2.139 |
| phosphatidylcholine | -0.129 | -0.874 |
| acetate | 0.377 | 1.119 |
| glucAc | 0.225 | 0.357 |
| Rv0950ko | -0.139 | 1.414 |
| Rv1096ko | -0.208 | 0.549 |
| Rv3684ko | -0.891 | 0.088 |
| delta_otsA_trehalose | -0.385 | 1.289 |