Top 10 genes with highest correlation to Rv0680c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1808/PPE32 | (cc=0.4326) | info on Rv1808/PPE32 |
| Rv2715/- | (cc=0.4292) | info on Rv2715/- |
| Rv1020/mfd | (cc=0.4097) | info on Rv1020/mfd |
| Rv0459/- | (cc=0.4017) | info on Rv0459/- |
| Rv2807/- | (cc=0.4004) | info on Rv2807/- |
| Rv1526c/- | (cc=0.3975) | info on Rv1526c/- |
| Rv2005c/- | (cc=0.3963) | info on Rv2005c/- |
| Rv2673/aftC | (cc=0.3899) | info on Rv2673/aftC |
| Rv1809/PPE33 | (cc=0.3894) | info on Rv1809/PPE33 |
| Rv1551/plsB1 | (cc=0.3813) | info on Rv1551/plsB1 |
Correlation of Rv0680c/- with Rv2807/-
Normalized LFCs for Rv0680c/-:
(description and provenance of datasets)
| Rv0680c/- | Rv2807/- | |
| Fe_supp_jason_reseq | -0.316 | -0.144 |
| low_pH_jason_reseq | -0.587 | -0.033 |
| NO_jason_reseq | -0.045 | 0.294 |
| B6_jason_reseq | -2.402 | -1.393 |
| MHCII_jason_reseq | -2.31 | -0.457 |
| Isoniazid02 | -1.157 | -0.937 |
| Rifampicin4 | -0.774 | -1.113 |
| Ethambutol3 | -0.886 | -0.028 |
| Meropenem3 | -1.205 | -0.686 |
| Vancomycin16 | -0.417 | -0.318 |
| Rv2680_day32 | -0.971 | 1.111 |
| H37Rv_KO_MarP | 0.676 | 0.429 |
| hypoxia_3wks | -0.335 | -0.359 |
| hypoxia_6wks | -1.516 | -0.495 |
| glycerol | -0.886 | -0.282 |
| cholesterol | 2.45 | 0.321 |
| AJ | -1.439 | -0.363 |
| Bibs02 | 1.544 | 0.362 |
| Bibs02c | 1.71 | 1.188 |
| BL6 | 1.016 | 0.668 |
| BL6a | 1.002 | 0.987 |
| BXD01 | -0.609 | 0.761 |
| BXD010 | 0.007 | 0.661 |
| BXD011 | 0.387 | -0.137 |
| BXD03 | -0.657 | 0.076 |
| BXD04 | 0.245 | 0.087 |
| BXD05 | 0.576 | 0.039 |
| BXD06 | 0.35 | 0.057 |
| BXD07 | -0.228 | 0.505 |
| BXD08 | -0.916 | 0.564 |
| BXD09 | 0.154 | 0.02 |
| CAST | -1.281 | 0.284 |
| CCcont | 0.147 | 0.757 |
| DS01 | -0.654 | -0.07 |
| DS02 | -0.039 | 1.254 |
| DS04 | 1.435 | 0.562 |
| DS0c | 0.946 | 1.196 |
| GP01 | 0.426 | 0.85 |
| GP02 | 0.307 | -0.389 |
| GP0c | 1.167 | 0.391 |
| NOD | 2.833 | -0.169 |
| NZO | -2.195 | -0.487 |
| PWK | -0.935 | -0.443 |
| H37Rv_KO_CtpC | 1.71 | 1.312 |
| H37Rv_KO_CtpD | -0.391 | 1.175 |
| H37Rv_KO_Rv1272 | -0.632 | 1.986 |
| H37Rv_KO_SugABC | 1.078 | 1.246 |
| H37Rv_KO_MbtN | 0.108 | 1.011 |
| Trans05 | 0.989 | 0.274 |
| macrophage_unactivated | -1.436 | -0.322 |
| IL1 | 2.159 | -0.356 |
| Rapamycin | 0.509 | -0.206 |
| Tcell | 0.512 | -1.212 |
| GMCSF | -0.676 | 0.169 |
| IFNab | 0.299 | -0.698 |
| IFNg | -0.027 | -0.567 |
| IFNg_GMCSF1 | -0.647 | -0.104 |
| Rv1432_day32 | -1.276 | 0.112 |
| Rv1565c_day32 | -2.515 | -0.193 |
| secA2_input | 0.473 | -1.518 |
| delta_Rv3594 | -0.535 | -0.82 |
| delta_Rv3717 | -0.672 | -1.514 |
| delta_Rv3811 | -0.167 | -0.754 |
| delta_Rv0954 | -0.388 | -0.91 |
| PonA1 | 0.21 | -1.415 |
| EccD1_KO | 0.763 | 1.181 |
| EspI_KO | 0.513 | 1.358 |
| PE35_KO | 0.572 | 0.435 |
| PPE68_KO | 1.072 | 1.225 |
| glycerol2 | -1.588 | -1.701 |
| lignocerate | -0.125 | -0.955 |
| oleate | -0.576 | -2.164 |
| phosphatidylcholine | -0.864 | -1.364 |
| acetate | -0.721 | -1.647 |
| glucAc | -0.187 | -0.036 |
| Rv0950ko | -1.661 | -0.642 |
| Rv1096ko | 0.507 | 0.0 |
| Rv3684ko | 0.177 | 0.331 |
| delta_otsA_trehalose | -0.796 | -1.844 |